Pseudoalteromonas maricaloris DSM 15914: R5H13_15790
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Entry
R5H13_15790 CDS
T09524
Name
(GenBank) 3'-5' exonuclease
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
pmaz
Pseudoalteromonas maricaloris DSM 15914
Pathway
pmaz03030
DNA replication
pmaz03430
Mismatch repair
pmaz03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pmaz00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
R5H13_15790
03430 Mismatch repair
R5H13_15790
03440 Homologous recombination
R5H13_15790
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pmaz03032
]
R5H13_15790
03400 DNA repair and recombination proteins [BR:
pmaz03400
]
R5H13_15790
Enzymes [BR:
pmaz01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
R5H13_15790
DNA replication proteins [BR:
pmaz03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
R5H13_15790
DNA repair and recombination proteins [BR:
pmaz03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
R5H13_15790
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_T
DEDDh_C
RNase_H_2
PHAT
Motif
Other DBs
NCBI-ProteinID:
WOX28080
UniProt:
A0A8I2KN87
LinkDB
All DBs
Position
1:complement(3531012..3531629)
Genome browser
AA seq
205 aa
AA seq
DB search
MNWFSHSVAKWRHKHLPFAQAELVVLDLELTGLDPKRHEIVSAGWLPIKNMRIQVKDAQY
HLNSEVRTLAQSPVFHGIDSSQLADGEYLQTLLLALQRALHGKVLVCHNVQMDWAFLKAA
FQRFELNVRPALLLDTMQIDKRRVLKQGYPLAQDALTLNACRMRYGLPPHQLHDALSDAL
ATAELLLAQSQAICAGGKCKIADLT
NT seq
618 nt
NT seq
+upstream
nt +downstream
nt
atgaactggttttctcactcagttgctaagtggcgccataaacatctgccgtttgcgcaa
gccgagttggtggtgcttgaccttgagctcacagggcttgatcctaagcgccatgaaatt
gtgtcggctggttggttgccgattaaaaatatgcggatccaggtgaaagatgcacagtat
catttgaacagtgaagtgcgaacgcttgcacaaagtccagtttttcacggtattgatagt
agtcaattggcagatggtgagtacttacaaactttgttgctggcgcttcagcgcgcgctc
cacggtaaagtgttggtatgtcataacgtacagatggattgggcgtttcttaaggcggca
tttcagcgctttgagctaaacgtaagacctgctttgttgttagataccatgcagatagat
aagcgtcgtgtgttaaagcaaggctatccgttggcgcaagatgcattaacactaaacgct
tgtagaatgcgttatggtttacctcctcatcaattgcatgatgcgcttagcgatgcttta
gcgacagcggaactactgttggcgcaatctcaggccatttgtgctggcggtaaatgtaaa
attgcggatttaacttga
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