Pseudoalteromonas maricaloris DSM 15914: R5H13_16400
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Entry
R5H13_16400 CDS
T09524
Name
(GenBank) LysM peptidoglycan-binding domain-containing protein
KO
K08307
peptidoglycan lytic transglycosylase D [EC:
4.2.2.29
]
Organism
pmaz
Pseudoalteromonas maricaloris DSM 15914
Brite
KEGG Orthology (KO) [BR:
pmaz00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
pmaz01011
]
R5H13_16400
Enzymes [BR:
pmaz01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.29 peptidoglycan lytic transglycosylase
R5H13_16400
Peptidoglycan biosynthesis and degradation proteins [BR:
pmaz01011
]
Peptidoglycan biosynthesis and degradation
Lytic transglycosylase
R5H13_16400
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Paralog
Gene cluster
GFIT
Motif
Pfam:
LysM
SLT
LysM2_CERK1_LYK3_4_5
DSBA
Motif
Other DBs
NCBI-ProteinID:
WOX30525
UniProt:
A0A8I2H9W9
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All DBs
Position
1:3660759..3662174
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AA seq
471 aa
AA seq
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MSRQAILSALTQVPVEKPVTSPAIVEVEPPKITTVKAPLRDDDLWQHIRQKLSFNTASHP
RLDKRIKWYLSQPNYLNVVNKRAAPYFYHVVKKVERKGLPIEIALLPFVESDFRPKAKSQ
QNAVGVWQLVDATAYHFGIKKDEWYDGRQDVLASTDAALDYLLYLHERFDGDWLHALAAY
NSGEGRVKKAIAKNRKAGKSTHFWHLTLPKETADYVPKLLALSHLLKTSPKGFKIPSLPN
KATTSILDIGQQFDVNQLAKLSGIKKRQLYALNQGILKHRSSPNGPHKVLLPLSEQTLLK
SAFFRENFSQGYTVKANDTLYRIALNAGMSVNALKALNNKRSDLIRVGEKLLVSESNEQL
DLLIDYDVSPYIKEIKAKPIPQVEHHHTIKQGESLWTISRHYKVAVKDLLNWNSLTAQSL
LKPGKVLMVFLPAPAAPKSNKTQPASSSISSIEALQSILRHGKPKQSESPN
NT seq
1416 nt
NT seq
+upstream
nt +downstream
nt
gtgagcaggcaagccattttgtcggctctcactcaagtgcccgtagaaaagccagtcacg
tctcctgctatcgttgaggtagaaccacccaaaatcactaccgttaaagctcccctcaga
gacgatgatttatggcaacacatacgccaaaagctcagttttaatactgcatctcaccca
aggcttgataagcgcataaaatggtatttatcacagcctaattatctcaatgtggtaaat
aagcgcgccgccccctacttttatcacgtagtaaaaaaggtagagcgcaaaggtctccct
attgaaatcgcattactcccttttgtcgaaagtgactttagaccaaaggccaaatcgcaa
caaaatgctgttggagtttggcaactagtggatgccactgcctaccatttcggcatcaag
aaagacgaatggtatgacggtcgacaggatgtgttagcatcgactgacgccgcgcttgat
tatttgctgtatttgcatgaacgctttgatggcgactggctacacgcgcttgcagcctac
aatagtggtgaagggcgcgtcaaaaaggccatcgcaaaaaatagaaaagcaggaaagtcg
acccacttttggcacttaacattaccaaaagaaaccgcagactacgtgcccaaactctta
gcgctcagccacttactaaaaacctcacccaagggttttaagataccaagtttgcccaac
aaggccactacgtcgatacttgatattggacagcaatttgacgtcaatcaactggctaaa
ctcagtggtatcaaaaagcgtcaactatacgcactcaatcaagggatcttaaaacataga
agctctccaaacggtccgcacaaagtgttattaccattatccgagcaaacattgttgaaa
agtgcatttttcagggaaaacttcagccaaggctacactgtcaaagccaacgacacactc
taccgcatcgcattaaatgcggggatgagcgtaaatgcactaaaagcgctaaacaataag
cgctctgatttgatccgagttggcgaaaagctattagtttccgagagtaatgagcagtta
gacttactcatcgactatgacgtaagcccttatattaaagaaataaaagccaagcccata
ccgcaagtggaacatcaccacaccataaaacaaggcgagtcattgtggactatcagccgt
cactacaaggtcgcggtaaaagatttattaaattggaattcactcacggcacagagtcta
ttaaaacctggcaaagtgttaatggtgtttttaccagctcctgctgcaccaaaaagcaat
aagactcaaccagctagctcctcaatctctagcattgaagcgctccaatcaatactgcgc
catggcaagccaaagcaaagtgagagcccaaattaa
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