Pseudoalteromonas maricaloris DSM 15914: R5H13_18515
Help
Entry
R5H13_18515 CDS
T09524
Symbol
rtcR
Name
(GenBank) RNA repair transcriptional activator RtcR
KO
K14414
transcriptional regulatory protein RtcR
Organism
pmaz
Pseudoalteromonas maricaloris DSM 15914
Brite
KEGG Orthology (KO) [BR:
pmaz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pmaz03000
]
R5H13_18515 (rtcR)
Transcription factors [BR:
pmaz03000
]
Prokaryotic type
Other transcription factors
Others
R5H13_18515 (rtcR)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RtcR
Sigma54_activat
Sigma54_activ_2
Mg_chelatase
AAA
AAA_5
AAA_16
AAA_22
AAA_19
MCM
AAA_30
NACHT
AAA_2
AAA_7
AAA_29
AAA_PrkA
IstB_IS21
AAA_14
ABC_tran
T2SSE
ResIII
Motif
Other DBs
NCBI-ProteinID:
WOX30542
LinkDB
All DBs
Position
1:complement(4149101..4150702)
Genome browser
AA seq
533 aa
AA seq
DB search
MVLKKTVAVSLIGTQLDFVGKRVDRWARWRPNVSLCSQADLVIDELHLLHDNHSTRLANN
VAVDIESVSPESTVTLHNLNFSNPWDFEEVYAKLFDWCQAQAFDTDNCEYLFHITTGTHV
VQICSFLLTESRHFPGRLVQTSPDNSNKNKSVGQVQIIDLDLSKYDQLATRFDSEHLEGK
AFLKGGIQTKNEAFNQLITQVEKVAIRAKDPMLLTGPTGAGKSQLATRIFQLKKKRAMLA
GRLVSVNCATLKGENAMAALFGHTKGAFTGAQQARDGYLRTANQGVLFLDEIGELGLEEQ
AMLLHAIENKLFHPVGSDQPVTSDFQLIAGTNRDLFKEVCKGRFREDLLARINLWTYRLP
ALRDRKEDIPANIDYEIDLYAQKMGERVRFNKEAKTLFERFALSERALWSGNFRDLSSAI
TRLCTLADSSRIAVSDVQEEIQRLEQNWYAGEQVSGDKNLDRYLSKAQLAELDTFDINQL
NYVLTICARHSSMAAAGRELFNVSRTKKSQVNDSTRLQKYLAKFGLSWRQIHS
NT seq
1602 nt
NT seq
+upstream
nt +downstream
nt
atggttttgaaaaagacagtagcagtaagtttgattggtactcagctcgattttgttggt
aagcgagtggataggtgggcgcgttggcggcccaatgtaagcctatgtagccaagctgat
ctggtcattgatgaattgcatttattacacgacaatcacagtacacggttggccaacaat
gtggcggttgatattgaaagtgtgtcgccagagtcgacagttacattgcacaacctcaac
ttcagtaacccgtgggactttgaggaggtgtatgccaaactttttgattggtgccaagct
caagcattcgataccgacaactgtgagtacctgtttcatatcaccacaggtactcatgtg
gtacagatctgcagctttttattgactgagagccgtcattttcctggccgcttggtgcaa
acctctcccgacaacagcaataaaaacaaatcggttgggcaagttcaaataatcgattta
gacctatccaaatacgaccagctagctactcgattcgacagtgagcacctagagggtaaa
gcatttttaaaaggtgggatccaaactaaaaatgaggcatttaaccagctgatcacccaa
gttgaaaaggtggcgatacgcgctaaagatcccatgttgctaacaggacctactggtgca
gggaaaagccagttggcaacacgtatttttcaattaaagaaaaagcgggcgatgctggcc
ggaagacttgtttcggtaaattgcgctacgctcaagggcgaaaatgccatggcagcattg
tttggtcataccaaaggtgcgttcacaggggcacaacaagcgcgagacgggtatttacgc
actgctaaccaaggcgtgttgtttttagatgaaatcggtgagttaggtcttgaagagcag
gccatgctattgcatgcaatagaaaataagttgtttcacccagtcggtagcgatcaaccc
gtaaccagtgactttcagttaatcgcaggaaccaatcgcgacttgtttaaagaggtctgc
aaaggtcgatttcgagaagacttgctcgcacggatcaacctatggacgtatcgattacca
gcgttaagagaccgcaaggaagatattccggctaatatagattacgagatagatctgtac
gcgcaaaaaatgggtgaaagggtgcgctttaataaagaagcaaaaacgttatttgaacgt
tttgccttgtcggagcgagccttgtggtcaggcaactttcgtgatttaagttcggctatc
acgcgtttgtgcactttggcagattcctctcggatagcagttagcgacgtacaggaagaa
attcagcggcttgagcaaaattggtatgcaggagaacaagtttcgggagataaaaatcta
gataggtatttatccaaagcacagcttgccgagttagatacgtttgatataaaccagtta
aattatgtgcttactatctgtgctcgccactccagtatggcggctgcaggcagagagttg
tttaatgtgagccgcaccaaaaagtcacaggtgaatgactccacaagactgcaaaaatat
ctcgctaaatttggtttaagttggcgtcaaatacatagttaa
DBGET
integrated database retrieval system
