KEGG   Pseudoalteromonas maricaloris: R5H13_20190
Entry
R5H13_20190       CDS       T09524                                 
Name
(GenBank) sigma-54 dependent transcriptional regulator
  KO
K10126  two-component system, NtrC family, C4-dicarboxylate transport response regulator DctD
Organism
pmaz  Pseudoalteromonas maricaloris
Pathway
pmaz02020  Two-component system
Brite
KEGG Orthology (KO) [BR:pmaz00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   02020 Two-component system
    R5H13_20190
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02022 Two-component system [BR:pmaz02022]
    R5H13_20190
Two-component system [BR:pmaz02022]
 NtrC family
  DctB-DctD (C4-dicarboxylate transport)
   R5H13_20190
SSDB
Motif
Pfam: Sigma54_activat Response_reg Sigma54_activ_2 AAA_5 HTH_8 AAA_2 AAA_3 AAA_16 AAA_7 Mg_chelatase AAA FleQ bpMoxR MCM HTH_50 PBECR2 Zeta_toxin
Other DBs
NCBI-ProteinID: WOX31261
LinkDB
Position
2:265335..266693
AA seq 452 aa
MTEEKTLLIIDDEQSIRDALKQLFEIEGYSVQCFSSATPALKKLSRQFSGVVLCDINMPE
VNGIQFLDQVMQFDSELPVVFLTGFADVEVAVKAIQKGAYDFFEKPVSEPLLDCIERALD
KRRLVMENRELKAQVKKKSAPGVRILGETKQMQQMLHLLDAVIDTPAEVLIEGETGTGKE
LVARYLHDHSERSNHNFVAINCGAIPEELIESELFGAKSGAFTGAKESREGKFSFAQGGT
VFLDEIEAMSAALQVKLLRVLEERSVTPVGSNTAIALDIRVVAATKVDLQTLVAQGKFRS
DLFYRLNLVKVMIPSLRSRKADIPLLYKHFSSIAVTRFHKPMQPISPELEAQLLAQDWPG
NVRELRNHAERHILLGGAMTASNNMQSNLSDETLSLAEKVSYYEQSLIEEALAQSQGSIK
DAMNLLKVPRKTLYDKMSKYGLNRTMFTNDDG
NT seq 1359 nt   +upstreamnt  +downstreamnt
atgactgaagagaaaaccctgttaatcatcgatgatgaacaaagtatacgagatgcacta
aagcaactatttgaaatagaagggtactctgtgcagtgtttttccagtgcgacgcctgca
ttaaaaaagctttctcgtcagtttagcggagttgtgctttgtgatatcaatatgcccgag
gttaatggtattcaatttttagatcaggtaatgcagtttgattctgagttacctgtggta
tttctaaccggctttgcggatgttgaagtggcggtaaaagctatccaaaaaggggcttac
gacttttttgaaaagcctgtgtcagagccgctacttgactgcatagaaagggcgcttgat
aaacgccggttggtgatggaaaaccgagagctaaaagcgcaagttaagaaaaagtctgcg
ccgggcgtgcggatcttaggtgagacaaaacaaatgcagcaaatgctgcatttgcttgat
gctgtgattgatacccctgctgaagtattgattgaaggtgaaaccggtacaggaaaggaa
ttggtggctcgatacttacatgaccatagcgagcgttcaaaccataactttgttgctatc
aattgcggcgcaattccagaagagctgattgaaagtgaattatttggtgccaaaagtggt
gcgtttacgggtgctaaagagtctcgcgagggaaaattttcttttgcgcaaggtggtacg
gtttttttggatgaaatcgaagccatgtctgcggctttacaagtgaagctgctgcgcgtt
ttagaagaaagaagtgtgacgcctgttggcagcaacactgcgatagcactggacattaga
gtggttgcagcgaccaaagtggatttacaaaccttagtcgcacaaggtaaattccgttcg
gatttattttatcgacttaacctcgtcaaagtgatgatcccatcacttcgttccagaaaa
gctgatattccgctgctatataaacactttagctccattgcagttactcgctttcataaa
cctatgcagccaattagtcctgaattagaggcgcagctgctagcgcaagactggcctggg
aacgtgcgagagctgagaaaccacgccgagcgccatattttactcggtggtgcgatgact
gcgagtaacaacatgcaaagcaatttgtctgatgaaacgttgagtttggctgagaaggtg
agctactacgaacaatcgttaattgaagaagcactggcacaaagccaaggtagtataaaa
gatgcgatgaatttattaaaagtgccgagaaaaaccttgtacgacaagatgagcaagtat
ggtttaaatcgcactatgttcaccaatgatgatgggtga

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