Pseudoalteromonas maricaloris DSM 15914: R5H13_20525
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Entry
R5H13_20525 CDS
T09524
Name
(GenBank) deoxyribodipyrimidine photo-lyase
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
pmaz
Pseudoalteromonas maricaloris DSM 15914
Brite
KEGG Orthology (KO) [BR:
pmaz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pmaz03400
]
R5H13_20525
Enzymes [BR:
pmaz01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
R5H13_20525
DNA repair and recombination proteins [BR:
pmaz03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
R5H13_20525
Prokaryotic type
R5H13_20525
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
FAD_binding_7
DNA_photolyase
Motif
Other DBs
NCBI-ProteinID:
WOX31326
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All DBs
Position
2:complement(340570..342048)
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AA seq
492 aa
AA seq
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MINLVWLKRDLRVFDHRPLYEACNNGRPTLILYVVEPEYWQLPDTSERQFQFVKESLLSL
AEQLQLLGGTLTIRQGDIIEILEKIHQHIAIATLYCHQETGNTWTFERDLRVIAWCKERH
VTYEEYRQQAVFRGKVNRDKWQQQAEDWLQSDCLPTPSKINPLLQQHSGIALLNDYLGND
SNSAPKPQLGGLKAAQQTLNSFFNHRIDNYLFGISSPVKAVNSSSRLSPYLAYGVLSLRD
VLQQTLALNVDSKRNKSSFLSRLYWHSHFVQKLESEPLYAERAVHASLIAMRASEFSHQR
HELWAHGNTGVPFIDACMRMLITTGWINFRMRAMLMAFSSYHLWLDWQQPAARLATLFID
YEPGIHYPQVQMQSGTTGINPFRIYNPITQGQKYDPEGHFIRRYIPELNHVPTHYLHTPW
LYTGLKEDQYQRPAILPDDAAKIAREKISAFYKQHLDKDETGRVLHTHASRRRSSRGRKK
QASSDKNQLKLF
NT seq
1479 nt
NT seq
+upstream
nt +downstream
nt
atgattaatctcgtttggctcaaacgtgacttaagagtgttcgaccatagaccactttac
gaagcgtgtaataatggcagaccaaccctaatattgtatgttgttgagcccgaatattgg
caactccccgataccagcgaaagacaatttcaatttgtaaaagagtcgctgctaagcctt
gctgagcagctgcagcttttaggtggcacgctgacgattcgccagggcgatatcattgaa
atattagaaaagatccatcaacacatcgcgatagctaccctttattgccatcaagaaacg
gggaatacatggacatttgagcgcgatttgcgtgttattgcctggtgcaaagaaagacac
gtaacgtatgaagaatatcgccaacaagccgtattcaggggaaaagtgaatcgtgataag
tggcaacagcaagccgaagactggctgcaaagcgactgtctaccaaccccttcaaaaatt
aatcctctgctgcaacagcatagtggtattgcactcttaaatgattaccttgggaatgac
agcaactcagcgccaaagccacaattaggtggactcaaagccgcacagcaaaccttgaat
agcttttttaatcataggatagacaactatttatttggtatctcaagcccggtaaaagct
gtgaacagtagctccagactcagtccgtatttggcctatggcgtgctaagcctcagggat
gttttacaacaaacccttgctttaaatgttgactcaaaacgcaataagagcagtttttta
tcacggctttactggcatagccactttgtgcaaaagctcgaatcagaaccgctttatgct
gagcgtgcagtgcatgcatccctaattgctatgcgtgcgagtgaatttagtcaccaacgt
catgaactttgggctcacggtaacacgggagtcccctttattgatgcctgtatgcgaatg
ctgatcaccacaggctggataaactttcgcatgcgcgccatgttgatggcgttttcaagc
tatcatctgtggcttgattggcaacaaccagcagcaagacttgccactctatttatcgat
tatgaacctgggatccactatcctcaggtacaaatgcagtcaggcactactgggataaat
ccgtttcgcatctataaccccataacgcaggggcaaaaatatgatccagaaggtcacttt
attcgccgctacattcctgagctcaatcacgttccaacgcattacttgcatacgccttgg
ctttatactggcttaaaagaagaccaatatcagcgccctgccatattacccgatgacgca
gcaaaaattgcccgtgaaaaaatctctgcattttataaacaacatctagataaagatgaa
acaggtagagtgcttcacactcacgcttcaaggcgtcgctcaagtcgtgggcgcaaaaaa
caagcaagttctgataaaaatcagttaaaactattctaa
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