Pseudoalteromonas maricaloris DSM 15914: R5H13_21815
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Entry
R5H13_21815 CDS
T09524
Symbol
sbcD
Name
(GenBank) exonuclease subunit SbcD
KO
K03547
DNA repair protein SbcD/Mre11
Organism
pmaz
Pseudoalteromonas maricaloris DSM 15914
Brite
KEGG Orthology (KO) [BR:
pmaz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pmaz03400
]
R5H13_21815 (sbcD)
DNA repair and recombination proteins [BR:
pmaz03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
R5H13_21815 (sbcD)
Archaeal homologous recombinant proteins
R5H13_21815 (sbcD)
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Gene cluster
GFIT
Motif
Pfam:
Metallophos
Metallophos_2
SbcD_C
Motif
Other DBs
NCBI-ProteinID:
WOX31580
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Position
2:637498..638697
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AA seq
399 aa
AA seq
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MKVLHTSDWHLGQSFYEHDRSEEHQLFLDWLCDALVEQQVDVLLISGDIFHTATPPASAE
KQLYTFIQKASQLCPQLHIILIAGNHDSANRIETAKPLLTLFNTHVIGRFNKQAPEQVVI
DLPIAAQHMHVVAMPFLRSADLPKPLADEFDYQTGVQLAYQHALSTIGEVKGPIVLMGHL
HAKGGTISEDSERNLNIGGFDAVSAGVFGEQFDYVALGHLHKAQTVAKQSAIRYSGTPLP
MSFSERNYKHQVLLAEFNEQGLVDVNPLYVPRFKDVLYIPEDGAKRLAELCEAIAAQDFS
KFDSAPYVRLKLSAAETNSRFRAEIDEALKGKDIKFCGIERVSKGAAASEWLFEDLGKVE
SLSPNTLLDIAYREIEPEQEKAPATLHEKLAEVIASMEE
NT seq
1200 nt
NT seq
+upstream
nt +downstream
nt
atgaaggttttacacacgtctgactggcacttagggcaatcgttttacgagcatgatcgc
agtgaagagcatcagctgtttttagactggctatgcgatgcgctggtggaacagcaagtc
gatgtactgttgatcagcggtgatatttttcataccgcaacaccgcccgccagtgctgaa
aagcaactgtatacctttatccaaaaagcatctcaactttgccctcagctgcacattatt
ctgattgcaggcaaccacgattccgctaatcgcattgaaaccgcaaaaccactcttaacc
ttattcaacacccatgttattggacgctttaacaaacaagcgcctgaacaagttgttatc
gatttacctatcgcagcgcagcatatgcatgttgtggcaatgccatttttgcgcagtgct
gatttaccaaaaccgctagctgacgagtttgactatcaaaccggggtacaattagcttat
cagcatgcgctaagcacgataggagaagtgaaaggtcctattgtgctaatggggcatctg
cacgccaaggggggaacgatttctgaagattctgagcgtaacctcaacattggcggtttt
gatgcggtatctgcaggcgtgtttggcgagcagtttgactatgttgcgctaggccattta
cataaagcgcaaaccgtcgctaagcaaagtgctatcagatatagcggcacacctttgccg
atgtcattttccgaacgcaattataagcatcaagtattgctcgctgaatttaatgagcaa
ggtctggtcgatgtaaaccccctttacgttccccgttttaaagatgtgttatatatccct
gaagatggtgcaaagcgcttggctgaattatgcgaagctatcgcggcgcaggattttagc
aagttcgatagcgctccctatgttcgcttaaaattatctgcagctgaaaccaatagccgc
tttcgagccgagattgatgaagcgctaaaaggaaaggatattaagttttgtggtattgag
cgggtgtctaaaggcgcagccgccagtgagtggttgtttgaagatttgggcaaagttgaa
tccttatcgcccaataccttgttggatattgcctatcgcgaaattgaacctgagcaggaa
aaagcacccgcgacattacatgaaaagttagcagaagtgatcgcgagcatggaggagtag
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