Prochlorococcus marinus AS9601: A9601_03271
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Entry
A9601_03271 CDS
T00464
Symbol
uvrD
Name
(GenBank) UvrD/REP helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
pmb
Prochlorococcus marinus AS9601
Pathway
pmb03420
Nucleotide excision repair
pmb03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
pmb00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
A9601_03271 (uvrD)
03430 Mismatch repair
A9601_03271 (uvrD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pmb03400
]
A9601_03271 (uvrD)
Enzymes [BR:
pmb01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
A9601_03271 (uvrD)
DNA repair and recombination proteins [BR:
pmb03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
A9601_03271 (uvrD)
MMR (mismatch excision repair)
Other MMR factors
A9601_03271 (uvrD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PcrA_UvrD_tudor
UvrD_C_2
AAA_30
Viral_helicase1
ResIII
DEAD
Motif
Other DBs
NCBI-ProteinID:
ABM69615
UniProt:
A2BPA4
LinkDB
All DBs
Position
complement(300929..303337)
Genome browser
AA seq
802 aa
AA seq
DB search
MPQNNNFLFKSLNNQQLQAVKHVYGPLLVVAGAGSGKTKALTHRIANLIEGNSIDPYNIL
AVTFTNKAAKEMKARLEVLLAQELAFNQFGQPWTTLKEIDQNQLRTNVHKDRLQNLWIGT
FHSLFSRLLRYDIEKYTDPEGLKWTRQFSIYDETDSQTLVKEIISQDMNLDPKRYDPKKI
KRLISNAKNQCLTSNDLLEKADNNFDKTVAEAYKRYRISLSKNNSLDFDDLLLLPVFLLR
QNDIVRDYWHKRFKHILVDEYQDTNRTQYELIKLITAGNTEPKKFFNWEDRSIFVVGDAD
QSIYSFRAADFRILIGFQEDFKTSINDDTKSSLIKLEENYRSSSNILDAANSLIENNSER
IDKVLKATKEKGELLTLLSCDDEISEAEAITNKIKSLNNYNQNPIWKNFAILYRTRAQSR
VLEESLVRWRIPYTIFGGLRFYDRREIKDAIAYLKVLVNSSDNVSLLRIINVPRRGIGKT
TIQKLNELSNRLNIPLWEVLNDKQSLEETIGRSSKGINKFTAVMNDLLCYLENSGPAQLL
QLILEKSGYLSDLLSNGSEESEDRRNNLQELINAATQYEEETESGDVEGFLSTAALTTDN
DTKKNNPNSVTLMTLHNSKGLEFQNVFITGLEQGLFPSHRSIDTPSLLEEERRLCYVGIT
RAKERVFLSHARERRLWGGMREATIPSIFLSEIPEDLMDGELPQTGGASIRRDLHLDRLT
RVDRNNPNEFVNKPINAVRKLYSGPSKGKSWIVGDKLIHTKFGKGEIIHIFGSGEKISLA
VKFGDKGSKILDPRLAPIRYVS
NT seq
2409 nt
NT seq
+upstream
nt +downstream
nt
gtgcctcaaaacaacaatttcctttttaagtccctaaacaatcaacaacttcaagcagta
aaacatgtttatggaccactattagttgtagcaggtgcaggtagcggaaaaactaaggca
cttactcacagaattgcaaaccttattgaaggtaactctatagatccctataacattctc
gcagtaactttcactaacaaagctgctaaagaaatgaaagctagattagaggttcttctg
gcccaagaactagcttttaatcaatttggccagccttggacaactctcaaagaaattgat
caaaatcaattaagaacaaacgttcacaaagacaggcttcagaacctttggatcggtacc
ttccattctttattttcaagacttctgagatacgatattgaaaaatatactgatccagaa
ggcctaaaatggacaaggcaattttcaatttacgatgaaacagattctcaaacattagta
aaagaaattatcagtcaagatatgaatcttgatccaaaaagatatgatcccaaaaagatt
aaaagattaataagtaatgctaaaaatcaatgcttaacttctaatgatcttttagaaaaa
gcagataataattttgataaaacagttgcagaagcctacaagagatatagaatatcgctc
tcaaaaaataattctttagattttgatgatcttttacttttgcctgttttcttattgagg
caaaatgatatagtcagagattactggcacaaaagatttaaacatattttagttgacgaa
tatcaagacacaaatagaacacaatatgaacttataaaattaattacggctggaaatact
gaaccaaaaaaattcttcaattgggaagatcggtcaatttttgtagttggagatgctgat
caaagtatttatagtttcagagcagctgacttcagaattttaattggttttcaagaagat
tttaagacttctatcaatgacgatacaaaatcatctttaattaaattggaagaaaattat
aggtcatcttccaatatacttgatgctgcaaactcactaattgaaaacaactctgaaaga
attgacaaagttttaaaggctactaaagaaaagggggaacttttaacgttactcagctgt
gatgatgaaatttccgaggcagaagcaattaccaataaaataaaatcactcaataactat
aatcaaaacccaatttggaaaaattttgcaattttatatcgaaccagagctcagtcgaga
gtattagaagaatctcttgtaaggtggcgcattccttatacaatttttggaggattacgt
ttttatgatcgaagagaaattaaagatgcaatagcatatttgaaagttctggttaattct
tcagataacgttagtcttttacgaatcattaatgttcctagaagagggattggtaagact
actattcaaaaacttaatgaactatctaataggttaaatatcccattatgggaggttctt
aatgataagcaaagtcttgaagaaacaataggccgatcatcaaaaggaattaataaattt
actgcagttatgaatgatctactgtgttaccttgaaaattctggtccagctcaactacta
caacttatattagaaaaaagtggttatttaagtgacttgctctctaatgggtctgaagaa
tctgaagatagaagaaataacttacaagaactaattaatgcagctactcaatatgaagaa
gaaacagaaagtggagatgtagagggatttctttctacagcagccttaacaactgataat
gatacgaagaaaaataatcctaactctgtaactctcatgactctgcataatagtaaaggt
ttagaatttcaaaatgtttttatcactgggctagaacaaggtctcttccctagccataga
tcaatagatactccctcacttcttgaagaggaaagaagattatgctatgtaggtattact
agagctaaagaaagagttttcttaagtcatgccagagaaagaagattatggggtggaatg
cgtgaagcaacaataccttcaatatttctttcggagatacccgaagatttaatggatggc
gaattaccacaaactggtggtgcttcaattagaagagatttgcatcttgatcgcttaaca
agagttgatcggaacaatccaaatgaatttgttaacaaaccaataaatgcagtaaggaaa
ttatattcagggccaagtaaagggaaaagctggatagttggagataagctaattcacaca
aaatttgggaaaggtgaaataatacatatttttgggagtggggaaaaaatatctttagca
gtaaaatttggtgataaaggaagtaaaattctagatcccagattagctccaattcgttat
gtaagttaa
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