Prochlorococcus marinus AS9601: A9601_12081
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Entry
A9601_12081 CDS
T00464
Symbol
recD
Name
(GenBank) possible exodeoxyribonuclease V 67 kD polypeptide
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
pmb
Prochlorococcus marinus AS9601
Pathway
pmb03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pmb00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
A9601_12081 (recD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pmb03400
]
A9601_12081 (recD)
Enzymes [BR:
pmb01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
A9601_12081 (recD)
DNA repair and recombination proteins [BR:
pmb03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
A9601_12081 (recD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_19
AAA_30
Viral_helicase1
AAA_11
UvrD_C_2
UvrD-helicase
nSTAND3
SH3_13
AAA_22
SLFN-g3_helicase
PIF1
PhoH
Helicase_RecD
NTPase_1
Pif1_2B_dom
AAA
AAA_16
RsgA_GTPase
NPHP3_N
AAA_5
AAA_24
UvrD_C
AAA_7
AAA_14
NACHT
AAA_25
TsaE
DnaB_C
ATPase
AAA_28
Motif
Other DBs
NCBI-ProteinID:
ABM70492
UniProt:
A2BRT1
LinkDB
All DBs
Position
complement(1024556..1026259)
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AA seq
567 aa
AA seq
DB search
MTKTSTDIEKFQYDHIFNLILGIFKFSEKKYGNFVKDVIRILLDFEKNGETIIDVDNSLI
IFELLEDGWPNKHIHVLKTIGLIGSLHSPFVLVNRKLSLSKWSKKIERVINSFLKKIDTV
NLMNSIIFKDDNKIDEIKNIFKYSNIVFLQGGPGTGKTTLIIKLILELLQIDNFLNIGLS
APTGKATARLKEALNDKKNISFNKFLDQIEFQTLHRWILNSQNKSLKLKFKLKELDIFII
DEMSMVNIDLIESVLDLLAKDCKIILVGDKNQLSPVNNCSIWNYLFEYSDNSSIKSCVVN
LEKTYRNIGDIALISSLIFNNDFSLLNQKIKELEKDNNSKEITISKSSEKDIPKDLLFSI
TSHLKQLNISTSNLSKKKYIFDESIDNLLLNEKDLVDKIFLDLQSHLILCEKNSGIWSVE
YLNEIVFGQKKPYDLKTLKEGIPIMCTKNNNELGLSNGDIGVLIGLKNKRKYLFRKFNDN
NEEIVSLIDPSNLENVVPAIAFTIHKSQGSESEKVNILWSQNYRRNKYAVKEKKDDQNIF
CRDNFERRLFYTAVTRAKKTLNIFYLN
NT seq
1704 nt
NT seq
+upstream
nt +downstream
nt
atgactaaaacctctacagatattgaaaagttccaatacgatcatatatttaatttaatc
ttaggtattttcaaatttagtgaaaaaaaatatggaaatttcgtaaaggatgtaataaga
atcttattagattttgaaaaaaatggtgaaactattattgatgttgataatagtttaata
atctttgaattattagaagatggctggcccaataaacatatacatgttctaaaaactata
ggtttgattggttcccttcattctccattcgtattagtaaatagaaaattatccttatca
aaatggtcaaaaaagattgaaagagttattaattcattcctaaaaaaaatagataccgtt
aatttaatgaactcaataatttttaaagatgataataaaattgatgaaattaaaaatata
tttaaatattcaaacatagttttccttcaaggaggaccaggtacgggtaaaaccacttta
ataattaagttaatattagaactccttcagattgataactttttaaatattggtttgtct
gctccaactggtaaagctacagcacgtttaaaagaagctctcaatgataaaaaaaatatt
tccttcaataaatttctagaccaaatagaatttcaaactttacatagatggattttaaat
tctcaaaataaatctcttaagttgaaatttaaactaaaagagcttgatattttcataatt
gatgaaatgtcaatggttaatatcgatttgattgaatcagttttagatttgctagcaaaa
gactgtaaaattattttagttggagataaaaatcaattgtctccagtaaataactgttct
atatggaattatttgtttgaatattccgataatagttcaattaaatcttgtgtagtaaat
ttagaaaaaacttatagaaatattggagatatagcattaattagtagtttaatatttaat
aatgatttttctttacttaatcaaaagataaaagaattagaaaaagataataattcaaaa
gaaattactatttcaaagagtagtgaaaaagatatcccaaaagatctattattttcgatt
acaagtcatctaaagcagttaaatatttcaacttcaaatttaagtaaaaaaaaatatata
tttgatgagagtatagataatttattgcttaatgaaaaagatttagtagataagatattt
ctggatttacaaagtcacttgattttatgcgaaaaaaattcgggaatatggagtgttgaa
tatttgaatgaaattgtttttggtcaaaaaaaaccctatgaccttaaaactcttaaagag
ggtattcccatcatgtgtacaaaaaataataatgaactaggattgtcaaatggggatata
ggagtacttataggtttaaaaaataaaagaaaatatctttttagaaaatttaatgataat
aacgaagaaattgtctcattaattgatccatctaatttagaaaatgttgtaccagcaata
gcttttactattcataaatctcaaggaagtgaatctgaaaaagtaaacattttgtggtcc
caaaattatagaagaaataaatatgctgtaaaagaaaaaaaagatgatcaaaatatcttt
tgcagagataattttgaaagaaggttattttatactgctgttacaagagcgaaaaaaact
ttaaatatattttatttaaattaa
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