Prochlorococcus marinus AS9601: A9601_16871
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Entry
A9601_16871 CDS
T00464
Symbol
rpoC2
Name
(GenBank) RNA polymerase beta prime subunit
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
pmb
Prochlorococcus marinus AS9601
Pathway
pmb03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
pmb00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
A9601_16871 (rpoC2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pmb03021
]
A9601_16871 (rpoC2)
03400 DNA repair and recombination proteins [BR:
pmb03400
]
A9601_16871 (rpoC2)
Enzymes [BR:
pmb01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
A9601_16871 (rpoC2)
Transcription machinery [BR:
pmb03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
A9601_16871 (rpoC2)
DNA repair and recombination proteins [BR:
pmb03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
A9601_16871 (rpoC2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_5
RNA_pol_Rpb1_4
RNA_pol_Rpb1_3
RPOC_hybrid
Biotin_lipoyl_2
Apocytochr_F_C
Prophage_tailD1
Motif
Other DBs
NCBI-ProteinID:
ABM70970
UniProt:
A2BT59
LinkDB
All DBs
Position
complement(1424120..1428220)
Genome browser
AA seq
1366 aa
AA seq
DB search
MTSSKPKKTSRVRKTTKNSKKNNPVTMPALAKTPPSFKNKVVDKKALKNLVSWAYKTHGT
AITAAMADNLKDLGFKYATQAAVSISVDDLKVPDAKQDLIGQAEEQISATEECYRLGEIT
EVERHTKVIDTWTETNERLVDAVKNNFNQNDPLNSVWMMANSGARGNMSQVRQLVGMRGL
MANPQGEIIDLPIRTNFREGLTVTEYVISSYGARKGLVDTALRTADSGYLTRRLVDVAQD
VIVREEDCGTERSIVVEAEDGKFGARLLGRLTAEDVLDAEENLLVPQNTAIDPALSGEIE
KASINKVKIRSPLTCEANRSVCRRCYGWALAHNHLVDLGEAVGIIAAQSIGEPGTQLTMR
TFHTGGVSTAESGVVRSKISGKVEFSSKAKIRGYRTPHGVEAKQAEVDFILKIVPQGNNS
GKAQKIEVSSGSLLFVDDGEEINSDITVAQITAGAVKKSVEKATKDVICDLAGQVRYDKV
IQPKEVTDRQGNITLKAQRLGRLWVLAGDVYNLPPNARPVISSGKSVDEGTVLAEASQSS
EFGGQVRLRESIGDSREVQIVTTSMSLTNFKLIEESTHSGQIYNLESIDGISYRLNISPG
SKISNGEVIADLTDERFRTKTGGLVKYAPGLSVKKARSSKNGFEVSQGGTLLWIPQETHE
INKDISLLMIEDMKWIEAGTEVVKDIFSQTSGIVTVTQKNDILREITIRNGTFHECDDEE
VLNRFTEEGNLVNPGEKILDGVDNKEILFVQKLETPKCRGLLLRTVEEFTIPDQAELPQL
AHVKQEKGPYLGLKAIQRLTYKDGELIKSVEGVELLRTHLSIESFDATPQMTIDVESIED
KNDSSINRLNLVILESILVRRDTISDSSHGSTHTELQVNDNQLVKAGDVISTTQILCKEK
GLVQLPNVVDDEPIRRLIVERQEDKIKIKISDKALVKVGDRVVDGDPISKSIKSTFCGEI
EEVSNSSVTLRYGRPYMVSPDSVLHVKDGDLVLRGDGLALLVFERQKTGDIVQGLPRIEE
LLEARRPRDAAILCKKSGIVQIKQGNDEESVSLSVIEKDDLVNEYQLLVGKNLMVSDGQQ
VAGGEPLTDGPLNPHELLDCYFNDLKDQKPLLDAARESISKLQRSMVSEVQNVYKSQGVA
IDDKHIEVIVRQMTSKVRIEDAGDTTLLPGELIELRQVEDTNQAMAITGGAPAEFTPVLL
GITKASLNTDSFISAASFQETTRVLTEAAIEGKSDWLRGLKENVIIGRLIPAGTGFSGFV
EELSSEAGPHPDILAEESGGYRRAQNLRPDYTVDMPQSPAVSSSAILDDPSDEDLETTRN
RHGIDPSSSNFAAFARPNAENQFSEDQLPDPAALEGLQEEGLLSDE
NT seq
4101 nt
NT seq
+upstream
nt +downstream
nt
atgacttcatctaaacctaaaaaaacatctagagtacgtaaaaccactaaaaactcaaaa
aagaacaatccagttacaatgcctgctcttgccaaaacgcctccatcttttaagaataag
gtagttgataagaaagccttaaaaaatttagtatcttgggcttataaaactcatggaact
gctataactgcagccatggctgataatcttaaagacttaggatttaaatatgctacccaa
gctgctgtctctatttcagtagatgacttaaaagttcctgatgctaaacaagatttaata
gggcaagctgaagagcaaatatctgctacagaagaatgctatagacttggtgaaattacc
gaagttgaaaggcatacaaaagttatagatacctggactgaaactaatgaaagattggta
gatgctgtaaagaataattttaatcaaaatgatcctttgaattccgtttggatgatggct
aattcaggagcaaggggtaacatgtctcaggtaaggcaacttgttggtatgaggggattg
atggctaatcctcaaggagaaatcattgaccttcccataagaaccaattttagagaagga
ttaacagttactgaatatgtaatttcttcttatggagcgaggaaaggtttggtggatact
gctctaagaacagcggattctggttatttgactcgaagattagttgatgtcgctcaagat
gtaattgttagagaagaagattgtggaacagaacgatcaatagttgttgaagctgaagat
gggaaatttggagcaaggcttcttggtaggcttaccgctgaggatgttttggatgccgaa
gaaaaccttcttgttcctcaaaacactgcaatagatcctgcattatcaggagaaattgaa
aaagcatccattaataaagtaaaaatcagatccccattaacgtgtgaagctaatagatcg
gtttgtaggaggtgttacggatgggcattggctcataatcatttagttgatttaggtgag
gcagttggaattattgctgctcaatcaattggcgagccaggaactcaattgacaatgaga
actttccatactggaggtgtatcgactgctgaaagtggagtagtaagatcaaaaatttct
ggtaaagttgaatttagttcaaaagcaaagattagaggttatagaacccctcatggcgta
gaagctaaacaagcggaagttgatttcatactaaaaatagttcctcaaggaaataattct
ggcaaagctcagaaaattgaagtttctagcggatcgcttctatttgtagatgatggtgaa
gaaattaattctgatataactgttgctcagattactgctggagcagtgaaaaagagtgta
gaaaaagcaacaaaagatgtcatctgtgatttggctggtcaagttagatacgataaagtt
attcaaccaaaagaggtaacggatagacagggtaatattaccttaaaagctcaaagattg
ggcagattatgggttttagctggagatgtttataacttaccccctaatgcaagacctgtt
atttcatctggaaaatctgtagatgaaggaactgttttagcagaagcgagtcaatcaagc
gagtttggaggacaagttcgattaagagaatcaataggagattcaagagaagttcagatt
gtgaccacatcaatgtctttaactaatttcaaattaattgaagaatctactcactcaggt
caaatatataatttggagtctattgatggtatatcctatcgtttgaatatttcccccgga
agtaaaatcagtaatggtgaggtaatagcagatctaacggatgaaaggttccgtacaaaa
actggtggcctagtcaaatatgcaccaggattaagtgtcaaaaaagcaagatcatctaaa
aatggttttgaagtaagtcaaggaggtacattgctctggattcctcaagaaacacatgaa
attaataaggacatatcccttttaatgatcgaagatatgaaatggattgaagctggtaca
gaagttgtaaaagatatttttagtcaaacatcaggaattgttactgttacacaaaaaaat
gatatccttcgtgaaataactataagaaatggaacttttcatgagtgtgatgatgaagaa
gttttaaatagatttacagaagaaggaaatcttgtaaatccaggtgaaaagattttagat
ggtgttgataataaagaaattctatttgttcaaaaattagaaacacccaaatgtcgagga
ttgttattaagaactgttgaagaatttactatccctgaccaagcggaattaccccaactt
gcacatgttaagcaggaaaaaggaccatatctaggcttaaaagctatccaaaggcttacc
tataaagacggtgaattgataaaatcagttgaaggagttgaattacttagaacacattta
agcattgaaagctttgatgctactcctcaaatgaccattgacgtagagtctattgaagat
aaaaatgattcatcaattaatagattaaatttagtaattttggagtctattcttgtaaga
agagacactatatctgactctagtcatggctcaacacatacagaactacaagttaatgat
aaccaattagtaaaagcaggagatgtaatttctactactcaaattctttgtaaagagaag
ggattggttcaattgccaaatgttgttgacgatgagcccataagaaggttaattgtcgaa
agacaggaagataaaattaaaattaaaattagtgataaagcattagttaaagtcggagat
cgcgtagttgatggtgatcctattagtaagtctataaaatcaactttttgcggagaaata
gaagaagtttctaatagttcagtaaccttaagatatgggaggccttatatggtttctcct
gattcagttttacatgtaaaagacggagatttagtacttaggggagatggtttagcttta
cttgtttttgaaaggcagaaaactggagacattgtacaaggattgcctcgcattgaagag
ttattagaagctaggagaccccgagatgctgcaattttatgtaaaaaatcaggaatcgtt
cagataaaacaaggtaatgatgaagaatcagtttctttgtcggttattgaaaaagatgat
ttagttaatgaatatcagctattagttggaaaaaatctaatggttagtgatggacaacaa
gttgcaggtggagaacctttaacagatggtccacttaatccgcatgaactattagattgc
tattttaatgatttaaaagatcaaaagccccttttggatgctgctcgagaatctatatca
aaactacaaagaagtatggtaagtgaggtgcagaatgtttataagtcacagggtgtagca
atcgatgacaagcatattgaagttattgttagacagatgacaagtaaagtccgtatagaa
gatgctggggatactactcttttgcccggtgaactcatagagttgaggcaagtggaagat
acaaaccaagcaatggcaattacaggaggagctccagcagaatttactcctgttttgttg
ggtattaccaaagcctccctcaatacagatagctttatttccgcagcatcgttccaagaa
acaacaagggttcttacagaagctgcaattgaaggtaaatctgattggttaagaggttta
aaagaaaatgttattatcggtagattaatccctgcaggcactggttttagcggatttgtg
gaggaattatcctcagaggctggacctcatcccgatatccttgcagaagagtctggtggg
tacagaagagcacagaacttaaggccagattatacggttgatatgccacaatcacctgct
gtaagctctagtgcaatacttgatgatcctagtgatgaagatttggagacaactagaaac
agacatggaatcgatccttcttctagtaatttcgcggctttcgcaaggcctaatgctgaa
aatcaattttctgaagatcaattaccagatcctgccgcattggagggattgcaggaggag
ggtcttctttctgatgaataa
DBGET
integrated database retrieval system
