Prochlorococcus marinus AS9601: A9601_19071
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Entry
A9601_19071 CDS
T00464
Name
(GenBank) Type II alternative RNA polymerase sigma factor, sigma-70 family
KO
K03086
RNA polymerase primary sigma factor
Organism
pmb
Prochlorococcus marinus AS9601
Brite
KEGG Orthology (KO) [BR:
pmb00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
A9601_19071
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pmb03021
]
A9601_19071
Transcription machinery [BR:
pmb03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
A9601_19071
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r3
Sigma70_r1_2
Motif
Other DBs
NCBI-ProteinID:
ABM71190
UniProt:
A2BTS9
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All DBs
Position
1644619..1645638
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AA seq
339 aa
AA seq
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MGIPLESAKSSSDNNFDEPRLPNTAGKSRKSKSSLTAKQSQKKSGRLASDSIGYYLSSIG
RVPLLTPAEEIELAHHVQNMKKLLQIPETDRTQRNLYQIKIGKRARDRMMAANLRLVVSV
AKKYQNQGLELLDLVQEGAIGLERAVDKFDPAMGYKFSTYAYWWIRQGMTRAIDNSARTI
RLPIHISEKLSKMRRVSRELSHKFGRQPTRLEMATEMGIDQKDLEDLISQSAPCASLDAH
ARGEEDRSTLGELIPDPNCEEPMEGMDRTIQKEHLGTWLSQLNEREQKIMKLRFGLDGEE
PLTLAEIGRQINVSRERVRQLEAKAILKLRVMTTHQKAA
NT seq
1020 nt
NT seq
+upstream
nt +downstream
nt
atggggatccctctggaatctgcgaaaagctcttcagataataattttgatgagccaaga
ttaccaaacactgcgggcaaatctcgcaaatcgaaatccagtcttacggcaaaacaaagc
caaaaaaaatctggcagactcgcttcagattctattggctattacttaagtagcattgga
agagtacctcttttgactccagcagaggaaatagagttagctcatcatgttcagaacatg
aaaaagttgctacaaattcctgaaactgatagaacccaacgaaatctttatcaaattaag
attggcaaaagagcaagagatagaatgatggcagctaatctaaggctcgttgtctcagtt
gcaaaaaaataccaaaaccaagggcttgaattattagatcttgtccaggaaggagctatt
ggacttgaaagagccgtagataaatttgatcctgctatgggatataaattctcaacttat
gcttactggtggattagacaaggaatgacgagggcaattgataacagtgctagaaccatt
cgtttgcctattcacataagtgaaaaactatccaaaatgagaagagtctccagagaatta
tcacacaaatttggcagacaacctacaagattggaaatggcaactgagatgggaattgat
caaaaagatttagaagatttaatttctcaaagtgctccttgcgcctccctagatgcacat
gcaagaggggaagaagacagaagtacacttggtgaactcatacctgatccaaactgtgaa
gagcctatggaaggtatggatagaactattcaaaaagagcatttaggaacttggctttct
caattaaatgaaagagagcaaaaaatcatgaagctcagatttgggctagatggtgaagaa
ccattaacactcgcagaaataggaagacaaattaatgtttcgcgagaaagagtaaggcaa
ctagaagctaaagcaatattaaagcttcgagtaatgacaactcatcaaaaagcagcttaa
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