Prochlorococcus marinus MIT 9515: P9515_17171
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Entry
P9515_17171 CDS
T00465
Symbol
rpoA
Name
(GenBank) Bacterial RNA polymerase, alpha chain
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
pmc
Prochlorococcus marinus MIT 9515
Pathway
pmc03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
pmc00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
P9515_17171 (rpoA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pmc03021
]
P9515_17171 (rpoA)
03400 DNA repair and recombination proteins [BR:
pmc03400
]
P9515_17171 (rpoA)
Enzymes [BR:
pmc01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
P9515_17171 (rpoA)
Transcription machinery [BR:
pmc03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
P9515_17171 (rpoA)
DNA repair and recombination proteins [BR:
pmc03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
P9515_17171 (rpoA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
RNA_pol_L_2
HHH_5
Motif
Other DBs
NCBI-ProteinID:
ABM72924
UniProt:
A2BYR3
LinkDB
All DBs
Position
complement(1516606..1517544)
Genome browser
AA seq
312 aa
AA seq
DB search
MLQYQIDRIDHQTANDRSQTGTFLIGPLERGQATTLGNSLRRVLMGGLEGSAVTAVRIAG
INHEYATIPGVREDVLDILLNCKQLSINSSNPELEIGRLVVSGPMEVKANDIQFSSQVEI
VDGDKPIATIQEGHNLELEIHVERGVGYRPVDRRNQETTSVDLLQIDAVFMPVKRVNFSI
DETAVAEGGTGRERLTMEVVTDGSTSPDDAIAEAANQLIELFQPLATVTMVEEIPEEPEP
SPEAQIPLEELNLSVRAYNCLKRAQVNSVSDLMGFSYEDLLEIKNFGSKSADEVIEALER
IGISIPQSRTSV
NT seq
939 nt
NT seq
+upstream
nt +downstream
nt
gtgttgcaataccagattgacagaatcgatcatcaaacagcaaatgatcgctcccaaaca
ggaacatttcttattggccccttagagagagggcaagctactaccctcgggaactcttta
agaagagtgcttatgggaggacttgaaggaagtgctgttactgcggtaaggattgcagga
atcaatcatgaatacgccactatcccaggggttagagaagacgttctagatattctttta
aattgtaagcaactttctattaatagttcgaacccagagcttgaaattgggagattagtt
gttagcggtcccatggaagtaaaggcaaacgatatacaattttcttcacaggttgaaatt
gttgatggagataagcctattgcgactattcaagagggacataatctagagcttgaaatt
catgtggaaagaggtgtaggttatagacctgtagatcgcagaaaccaagaaactacatct
gttgacttgcttcaaattgatgctgtatttatgcctgttaagagagtaaatttctctata
gatgaaactgcggtagcagagggtggaacaggtagagagagattaacaatggaagttgta
acagatggatcaactagccccgatgatgcaattgcagaagctgcaaatcagttaattgaa
ctttttcagccacttgcgactgttacaatggttgaagaaatacctgaagagccagaacca
tctccagaagctcaaattccattagaagaattaaacttgtctgttagagcgtataattgt
ctaaaaagagctcaagttaattctgtttcagatttaatgggatttagttatgaagatctt
ttagaaattaagaactttggctccaaatctgcagatgaggttattgaagctcttgagcgc
ataggtatttcaattccacaaagcaggacatctgtttaa
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