Prochlorococcus marinus NATL1A: NATL1_09981
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Entry
NATL1_09981 CDS
T00467
Symbol
dacB
Name
(GenBank) putative D-Ala-D-Ala carboxypeptidase 3 (S13) family
KO
K07259
serine-type D-Ala-D-Ala carboxypeptidase/endopeptidase (penicillin-binding protein 4) [EC:
3.4.16.4
3.4.21.-]
Organism
pme
Prochlorococcus marinus NATL1A
Pathway
pme00550
Peptidoglycan biosynthesis
pme01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
pme00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
NATL1_09981 (dacB)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
pme01002
]
NATL1_09981 (dacB)
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
pme01011
]
NATL1_09981 (dacB)
Enzymes [BR:
pme01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
NATL1_09981 (dacB)
Peptidases and inhibitors [BR:
pme01002
]
Serine peptidases
Family S13: D-Ala-D-Ala peptidase C family
NATL1_09981 (dacB)
Peptidoglycan biosynthesis and degradation proteins [BR:
pme01011
]
Peptidoglycan biosynthesis and degradation
DD-Carboxypeptidase/DD-Endopeptidase (Low molecular weight PBP)
NATL1_09981 (dacB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_S13
Motif
Other DBs
NCBI-ProteinID:
ABM75556
UniProt:
A2C246
LinkDB
All DBs
Position
919287..920522
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AA seq
411 aa
AA seq
DB search
MKKKLSLYIGLIIISINTANGNLFSIYSYVRQRININSITPEETNICYALQKKIEDYIDN
FNSKISVNILNKNGEFIVDINGKIPRIPASNQKILSSAFSLDNLGPNYILKTSLNEMSNG
GLYLDASGDPDFDKRHLDELLRGLNSKEFNTGIKLPILITSSKENTWWPPSWSYSDRKEE
YGAPITKYSIASNASTNALNNPIDNFMNELKTSLVRNNLASKYFIKPVYNDFSIDFVSTI
KSVNSAPLYILLNLVNSESHNYTAEVVFRHSLNNWSHDFPNVKYTKWINDQNFDSDDFIF
ADASGLSRENRVTTYGLSQFLRRMQLSRYSDYYFSSFSILGVRGSLKNVKAPINLKGRIL
AKSGRLSNVRSISGIILGKDKIFSIIVNNKENSTKNIINILSIVDNTNYCT
NT seq
1236 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaaaaaactttctttatatattggattaataattatatcgataaatacagctaat
ggtaatttgttttcgatatattcctacgtccgacaaagaattaatattaattctataact
cctgaagagacaaatatatgttatgcattacaaaaaaagatagaggattatattgataac
tttaatagtaaaataagtgttaatatattaaataaaaatggtgagtttattgtagatata
aatggaaaaattcctagaattcctgcatcgaatcaaaagattttgtcgagcgctttttct
ttagataatttaggaccaaactatattctcaaaacatctctaaatgagatgagtaatgga
ggcttataccttgatgcctctggtgatcctgactttgataaaagacatttagatgagtta
ctaagaggactaaatagtaaggagtttaatactggtattaaattaccaattttaatcact
agtagtaaagaaaatacttggtggcctcctagctggtcctattctgataggaaagaggag
tatggagcaccaattactaagtactcgatagctagtaatgcaagtacaaatgctttaaac
aatccaatagataattttatgaatgagttaaagacttctctagtaagaaataacttagca
agtaaatattttattaaacccgtttataatgatttttctatcgattttgtttctactatc
aaaagtgttaattctgcgcccttatatattttgcttaatctagttaattcagaaagccat
aattatacagctgaggttgtttttagacattcattaaataactggtctcatgattttcct
aatgttaaatacactaagtggataaatgatcagaactttgattcagatgattttatcttt
gctgatgctagtggtttatcaagagaaaatagagttaccacatatggtttatctcaattt
ttgagaagaatgcaattaagtagatattccgattattatttctcatctttttctatttta
ggggttagaggatcattgaaaaatgtaaaagccccaataaatctcaaagggagaattttg
gctaaatcaggaagacttagtaacgttagatctatttctggtattatattaggtaaagat
aaaatatttagtattattgttaataataaggaaaattcgacgaagaatattattaatatt
ttatcaatagtagataatactaattattgtacttaa
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