Prochlorococcus marinus NATL1A: NATL1_19811
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Entry
NATL1_19811 CDS
T00467
Symbol
rpoA
Name
(GenBank) Bacterial RNA polymerase, alpha chain
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
pme
Prochlorococcus marinus NATL1A
Pathway
pme03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
pme00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
NATL1_19811 (rpoA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pme03021
]
NATL1_19811 (rpoA)
03400 DNA repair and recombination proteins [BR:
pme03400
]
NATL1_19811 (rpoA)
Enzymes [BR:
pme01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
NATL1_19811 (rpoA)
Transcription machinery [BR:
pme03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
NATL1_19811 (rpoA)
DNA repair and recombination proteins [BR:
pme03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
NATL1_19811 (rpoA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
RNA_pol_L_2
HHH_5
Motif
Other DBs
NCBI-ProteinID:
ABM76537
UniProt:
A2C4X7
LinkDB
All DBs
Position
complement(1634849..1635787)
Genome browser
AA seq
312 aa
AA seq
DB search
MLQYQIDRIDHQVSNDRSQTGVFLIGPLERGQATTLGNSLRRVLMGGLEGSAVTAVRIAG
VNHEYATIPGVREDVLDILLNCKQISVDSRSQELEIGRLVVTGPADVKAKDIQFSSQVEV
VDGDRPIATVQEGHNLELEIHVERGVGYRPVDRKNEETSAIDLLQIDAVFMPINRVNFTI
DETAVAEGGSTRERLKMELVTDGSTSPDDALAEAANQLIELFQPLATVSMVEEIPEEPEP
AAEAQIPLEELNLSVRAYNCLKRAQVNSVSDLMGFSYEDLLEIKNFGSKSADEVIEALER
IGISIPQSRTSA
NT seq
939 nt
NT seq
+upstream
nt +downstream
nt
gtgttgcaataccagatagacaggatcgatcatcaagtttctaatgatcgttcccaaaca
ggtgtcttcctaattggacctcttgagagaggtcaagcaacaactttgggtaattctcta
cgcagagtgttgatgggcggactagaaggcagcgcagttacagctgtcaggattgcagga
gttaatcatgaatatgcaacaattcctggtgtaagagaagacgtgctagacatccttctt
aattgtaaacaaatttcagttgacagtcgtagtcaagagcttgagataggaagacttgtt
gtaacaggccccgctgatgttaaagcaaaggatattcagttctcatctcaagttgaagtt
gttgatggtgatcgtccaatagcaacagttcaggaggggcataacctagaactagaaata
catgtagaaagaggtgttggatatcgcccagttgacagaaaaaatgaggagacaagcgca
attgatctgcttcaaatagatgctgtatttatgcctataaatagagtgaattttactatt
gatgaaactgctgtggctgagggaggatcaaccagagaaagattaaaaatggagttggtc
accgatggatccacctccccagacgatgcattagcggaagctgctaatcaattaatcgaa
cttttccagcctcttgctactgtctcaatggtagaagagattcctgaagagccagagcct
gcagcagaggcccaaatccccctcgaggagttaaacttatctgtaagagcttataattgc
ctaaaacgagcccaagtgaactctgtttcagacttgatgggtttcagttatgaggattta
ttggaaattaagaacttcggttctaaatccgctgacgaagttattgaagctcttgagaga
attggaatttctattccacaaagtagaacttctgcatga
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