Polymorphobacter megasporae: KTC28_00880
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Entry
KTC28_00880 CDS
T08573
Symbol
ihfB
Name
(GenBank) integration host factor subunit beta
KO
K05788
integration host factor subunit beta
Organism
pmea
Polymorphobacter megasporae
Brite
KEGG Orthology (KO) [BR:
pmea00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pmea03032
]
KTC28_00880 (ihfB)
03036 Chromosome and associated proteins [BR:
pmea03036
]
KTC28_00880 (ihfB)
03400 DNA repair and recombination proteins [BR:
pmea03400
]
KTC28_00880 (ihfB)
DNA replication proteins [BR:
pmea03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
KTC28_00880 (ihfB)
Chromosome and associated proteins [BR:
pmea03036
]
Prokaryotic type
Nucleoid associated proteins
IHF (integration host factor)
KTC28_00880 (ihfB)
DNA repair and recombination proteins [BR:
pmea03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Facilitator
KTC28_00880 (ihfB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_euk_1
DUF917_C
HU-CCDC81_euk_2
LigT_PEase
Motif
Other DBs
NCBI-ProteinID:
UAJ10357
LinkDB
All DBs
Position
181368..181649
Genome browser
AA seq
93 aa
AA seq
DB search
MIRSELVTAVATANPHLTQRDVERVVATIFDTISEALAIGRRVELRGFGAFSTRAREART
GRNPRTGTAVEVDAKRVPYFKPGKHLRERLNVG
NT seq
282 nt
NT seq
+upstream
nt +downstream
nt
atgatccggtcggaattagtgacggcggtggccaccgccaatccgcatcttacgcagcgc
gatgtcgagcgcgtcgtcgcgacgatcttcgatacgatcagcgaagcccttgccatcggc
cggcgcgttgaacttcgcggctttggcgcattttcaacccgcgcccgcgaagcccgcacc
ggccgcaacccgcgcaccggcaccgcggtcgaggtcgatgccaagcgcgtgccgtatttc
aagcccggcaagcacttacgcgagcgcctcaacgtcggctaa
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