Glacieibacterium megasporae: KTC28_03590
Help
Entry
KTC28_03590 CDS
T08573
Name
(GenBank) DNA topoisomerase IB
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
pmea
Glacieibacterium megasporae
Brite
KEGG Orthology (KO) [BR:
pmea00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pmea03032
]
KTC28_03590
03400 DNA repair and recombination proteins [BR:
pmea03400
]
KTC28_03590
Enzymes [BR:
pmea01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
KTC28_03590
DNA replication proteins [BR:
pmea03032
]
Prokaryotic type
DNA Topoisomerases
KTC28_03590
DNA repair and recombination proteins [BR:
pmea03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
KTC28_03590
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_I
Top1B_N_bact
Motif
Other DBs
NCBI-ProteinID:
UAJ10825
LinkDB
All DBs
Position
complement(763242..764210)
Genome browser
AA seq
322 aa
AA seq
DB search
MLNYTDTSEPGITRRKRGKHWHYFAIDGVRITAADEIDRLNKLGVPPAYARVWFSPDPSG
HLQAVGYDAKGRKQYRYHESFRQQREADKYDRCGGFGEALPHLRAIVERDIAERGLGRSK
VLAAIVRLLDSGHVRVGNDVYASENESYGATTLLNEHSAVRGNKVRLEYRGKSGKMQRVV
IADEALAKIVRRCHDLPGQALFQYVGDDDEPHRIGSSDVNAYIREGMGDGFSAKHFRTWG
ASVIAFTAIRDGVTTLKEMLEPVAAALGNTPAISRKSYVHPALIALVNDGQMDKVVEAKL
PRPTRYLSAAERGLIAFLATAS
NT seq
969 nt
NT seq
+upstream
nt +downstream
nt
gtgctcaactataccgacaccagcgaacccggcattacgaggcgcaagcgcggtaaacac
tggcattattttgccatcgacggggtccgcatcactgcggcagacgagatcgaccgtctc
aacaagctcggcgtgccgccggcctacgcccgcgtgtggttcagcccggacccgtcggga
cacctccaggcagtcggctacgacgccaagggccgcaagcaataccgctatcacgagagc
ttccgtcagcagcgcgaggccgacaaatacgaccgctgcggtgggttcggcgaggcgctg
ccgcatcttcgggcgatcgtcgagcgcgacatcgccgagcgcggactcggccggtccaag
gtgctcgccgcgatcgtccggttgctcgattcagggcacgtccgggtcggcaatgacgtc
tatgcgagcgagaacgagagctatggcgcgacgaccttgctcaacgaacatagcgcggtt
cgcggcaacaaggtccggctcgaatatcgcggcaagtcgggcaagatgcagcgcgtcgtc
attgccgacgaggcgctcgccaagatcgtccggcgctgccacgacctgccgggacaggcg
ctgttccaatatgtcggcgatgacgacgagccgcaccgcatcggctcgtccgacgtcaac
gcctatatccgcgaggggatgggagatggcttctcggcgaagcacttccgcacatggggc
gcgagcgtcatcgccttcaccgcgatccgcgatggtgtcacgaccttgaaggagatgctc
gaacccgtcgcggcggcgcttggcaacacgccggcgatcagccgcaagagctatgtccat
ccggcattgatcgcgctcgtcaacgacggtcagatggataaggtcgtggaagcgaagctg
ccgcgtccgacgcgctatctcagcgcggccgaacgcgggttgatcgcctttctcgctacc
gcatcgtga
DBGET
integrated database retrieval system
