Polymorphobacter megasporae: KTC28_05305
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Entry
KTC28_05305 CDS
T08573
Symbol
miaB
Name
(GenBank) tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB
KO
K06168
tRNA-2-methylthio-N6-dimethylallyladenosine synthase [EC:
2.8.4.3
]
Organism
pmea
Polymorphobacter megasporae
Brite
KEGG Orthology (KO) [BR:
pmea00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pmea03016
]
KTC28_05305 (miaB)
Enzymes [BR:
pmea01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.3 tRNA-2-methylthio-N6-dimethylallyladenosine synthase
KTC28_05305 (miaB)
Transfer RNA biogenesis [BR:
pmea03016
]
Prokaryotic type
tRNA modification factors
Methylthiotransferases
KTC28_05305 (miaB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UPF0004
Radical_SAM
TRAM
IMPDH
Motif
Other DBs
NCBI-ProteinID:
UAJ11127
LinkDB
All DBs
Position
complement(1145253..1146665)
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AA seq
470 aa
AA seq
DB search
MLPADCDASVAESITPDDAAAAAVYGGAPPARGPVTQSYFVKTFGCQMNVYDSERIGELL
EAEGYAAAPDAARADVVVLNTCHIREKAAEKVYSDIGRLKASRRPNGIKPVVVVAGCVAQ
AEGAEIVRRAPAVDVVVGPNAYHRLPAMLKAGGVDTDMPVESKFAVLPPRRAVVPASAFL
TVQEGCDKFCTFCVVPYTRGAELSRPADALVAEAEALVAGGARELTLLGQNVNAYRDVTT
SFADLLARIAAVRGLVRLRYTTSHPRDMNDELIAAHRDLPQLMPYLHLPVQSGSDRLLKA
MNRAHTRASYLAILDRLRAARADIALSGDFIVGFPGETDADFAATLSIVREVGYAQAYSF
KYSPRPGTPAATMGEQVPEDVKDARLAELQATIGETALAFNRASVGKRCDVLLERPGRRP
GQLIGKSPWLQSVFVVSPSAKIGDIVTVDLIDAQPNSLEGAPVILTRAAA
NT seq
1413 nt
NT seq
+upstream
nt +downstream
nt
atgctgccggcagattgtgacgcctccgtcgccgagtcaatcacgccggatgacgcggcg
gcagcggcggtttatggtggcgctccacccgcgcgaggccccgtgacccaaagctatttc
gtcaagaccttcggctgccagatgaacgtctatgattcggagcggatcggcgagttgctc
gaggccgagggctatgccgccgcgcccgacgccgctcgcgccgacgtcgtcgtgctcaac
acctgccacatccgcgaaaaggcggccgagaaggtctattccgacatcggccggctgaag
gcgtcgcggcggcccaacgggatcaagccggtcgtcgtcgtcgccggttgcgtcgcgcag
gccgagggggcggagatcgtccgccgcgcccctgcggtcgacgtcgtcgtcgggccgaac
gcgtatcaccggctgccggcgatgctcaaagcgggcggggtcgacaccgacatgccggtc
gaatcgaagttcgccgtcctgccgccgcgccgcgccgtcgtgcccgcgtcggcgttcctc
acggtgcaggagggctgcgacaaattctgcaccttctgcgtcgtgccgtacacgcgcggc
gccgagctttcgcgccccgccgacgcgctcgtcgccgaggccgaggcgctcgtcgcgggc
ggtgcgcgcgaactcacgttgctcgggcagaacgtcaacgcctatcgcgatgtgacgacg
tcattcgccgatttgctggcgcggatcgccgccgtgcggggcttggtgcgcctgcggtac
acgacgtcgcatccgcgcgacatgaacgacgagctgatcgccgcgcatcgggacctgccg
cagctgatgccgtacctccatctgccggtgcagtcgggatccgaccgtcttctcaaggcg
atgaaccgcgcccacacccgggcgagctatcttgcgatcctcgaccgcctccgcgccgcc
cgcgccgatatcgcgctgtcgggcgacttcatcgtcggttttccgggcgaaaccgatgcc
gatttcgccgcaaccctcagcatcgtgcgcgaagtcggctacgcccaggcgtacagtttc
aaatactccccgcgccccggcacccccgccgcgacgatgggcgagcaggttccggaagac
gtcaaggacgcccggctcgccgaactccaggcgacgatcggcgaaaccgcgctcgcgttc
aaccgcgccagcgtcggcaagcgctgcgatgtgttgctcgaacgccccggtcgccgcccc
ggacagctgatcggcaagtcgccatggctgcaatcggtattcgtcgtctcgccatcggcg
aagatcggggatatcgtcaccgtcgacctgatcgatgcccagcccaacagcctcgaagga
gcgcctgtgatcctgacccgagctgccgcctag
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