KEGG   Polymorphobacter megasporae: KTC28_06415
Entry
KTC28_06415       CDS       T08573                                 
Name
(GenBank) ligase-associated DNA damage response DEXH box helicase
  KO
K03724  ATP-dependent helicase Lhr and Lhr-like helicase [EC:5.6.2.6 5.6.2.4]
Organism
pmea  Polymorphobacter megasporae
Brite
KEGG Orthology (KO) [BR:pmea00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:pmea03400]
    KTC28_06415
Enzymes [BR:pmea01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     KTC28_06415
    5.6.2.6  RNA 3'-5' helicase
     KTC28_06415
DNA repair and recombination proteins [BR:pmea03400]
 Prokaryotic type
  Other factors with a suspected DNA repair function
   DNA helicases
    KTC28_06415
SSDB
Motif
Pfam: DEAD_assoc WH_Lhr DEAD Helicase_C ResIII Cas3-like_C_2 T4SS-DNA_transf
Other DBs
NCBI-ProteinID: UAJ11330
LinkDB
Position
complement(1373412..1375832)
AA seq 806 aa
MPPLPAPILDWFATRGWGVRRHQLEMLAAARAGEHALLVAPTGSGKTLAGFLPSLAELIA
EPVEGLHTLYVSPLKALAVDVQRNLLNPIAEMGLDIRVETRTGDTPSDRKARQRERPPQI
LLTTPESLSLLISYPDADRMLGQLKTVIVDEVHAFATTKRGDILNLAMARLQALSPNLRR
VALSATIADPEAYQGWLAPDADAASVRLVHGDPGAEPHVDILVPDGRIPWAGHNGRYAAR
EVIKLIARYKLTIVFVNTRAVAELIFRDLWAENDASFPIGIHHGSLSPEARRKVENAMAT
GRLRAIVATASLDLGIDWGDVDLVVQMGAPKGSSRLLQRIGRANHRMDEASEAVVVPGNR
FEYLESLAARDAVEAHELDVDLFRPGGVDVLAQHLMACACSAPFAADAMYDEVRSSAPYA
GLPRAEFDRTLGFIESGGYALRAYERYKRLTLGPDGLYRVSHPRMAAQHRLNAGTIVEAA
ALNVVYGKAGRGRGRSFGKVEEWFASQLRIGDSFMFAGQVLEVTGFDGPDLFVKLGKGDP
RVPTYVGGRMPLSTNLARRVRGLFNTPERWAEMPPDVCEWLDIQRQRSSLPGMDDLLVET
FPADGRNYMVAYGFEGRNAHQTLGMLLTQRMEKAGLAPLGFVGSDYMVATWSLNPVSDPK
PLFSPDVFEDELAEWIAGSPFLRRAFREVAVIAGLIDRVHPGQHKTGKQVTFSSDLIYDV
LRRHEPDHLLLTAAWTDARSKITDIGRLAGLLERSQTHLVHRVLDRVSPLAVPVLLEAGK
ERVFGAADDALLIEADALAEAAMRLD
NT seq 2421 nt   +upstreamnt  +downstreamnt
atgccgccgctgcccgccccgattctcgactggttcgccacgcgcggctggggtgtgcgg
cggcaccaactcgagatgctcgccgccgcccgcgccggggagcatgcgttgctcgtcgcg
ccgacggggtcgggcaagacgctggccgggttcctgccgagccttgccgagctgatcgcg
gagccggtcgaggggctgcacacgctctacgtctcgccgttgaaggcgctcgcggtcgac
gtccagcgcaacctgctcaacccgatcgccgagatggggctcgatatccgggtcgagacg
cggaccggggatacgccgtccgaccgcaaggcccgccagcgcgagcggccgccgcagatc
ctgctgacgacgccggagtcgctgtcattgctgatcagctaccccgacgccgaccggatg
cttgggcaactcaagacggtgatcgtcgacgaggtccatgcctttgcgacgaccaagcgc
ggcgacatcctcaacctcgcgatggcgcggctccaggcgctcagccccaacctccgccgc
gtcgcactgtcggcgacgatcgccgaccccgaggcgtatcagggctggctcgcccccgat
gccgatgccgcgagcgtccgcctcgtccacggcgacccgggggccgagccgcacgtcgac
atcctcgtccccgacgggcgcatcccgtgggcagggcacaacgggcgctatgcggcgcgc
gaggtgatcaagctgatcgcccgctacaagctgaccatcgtcttcgtcaacacccgcgcg
gtcgccgagctgatcttccgcgacctgtgggcggaaaacgacgcttccttcccgatcggc
atccaccacggctcgctcagtcccgaggcgcgacgcaaggtcgagaacgcgatggcgaca
gggcggctgcgcgcgatcgtcgcgaccgcgagcctcgacctcggcatcgactggggcgac
gtcgacctcgtcgtccagatgggcgcgccgaagggatcgtcccgtttgctccagcgcatc
ggccgcgccaaccaccggatggacgaggcgtcggaggcggttgtcgtccccggcaaccgc
ttcgagtatctcgaaagcctcgcggcgcgcgacgcggtcgaggcgcatgagctcgacgtc
gacctgtttcgccccggcggggtcgacgtcctcgcccagcatttgatggcgtgcgcctgc
tcggccccgttcgcggcggacgcgatgtacgacgaggtgcggtcgtccgccccctacgcc
gggctgccccgcgccgagttcgaccgcaccctcggcttcatcgagtcgggcggttacgcg
ctacgtgcttatgaacggtacaaacggctgacgctcggccccgatgggctgtaccgcgtc
agccatccgcggatggcggcgcagcaccgcttgaatgccgggacgatcgtcgaggcggcg
gccttgaatgtcgtctatggcaaggcggggcgcggacgggggcgaagcttcggcaaggtc
gaggagtggttcgccagccagctccgcatcggcgacagcttcatgttcgcggggcaagtc
cttgaagtcaccggctttgacggccccgacctgttcgtcaagctcggcaagggtgacccg
cgcgtgccgacctatgtcggcgggcggatgccgctgtcgaccaacctcgcgcggcgggtg
cgcgggttgttcaacacccccgaacgctgggccgagatgccgcccgacgtctgcgaatgg
ctcgacatccagcgccagcggtcgtcgctgccggggatggacgacctgctcgtcgagacc
ttcccggcggacgggcgaaactacatggtcgcgtatggcttcgaggggcgcaacgcccac
cagacgctcggcatgctcctgacccagcggatggaaaaagccgggcttgccccgctcggc
ttcgtcggcagcgactacatggtggcgacatggagcctgaacccggtcagcgaccccaag
ccgttgttctcacccgacgttttcgaagacgagcttgccgaatggatcgccgggtcgccg
ttcctgcggcgggcgttccgcgaggtcgcggtgatcgcggggctgatcgaccgggtccat
ccgggacagcacaagaccggcaagcaggtgacgttttcgagcgacctgatctacgacgtc
ctccggcggcacgagcccgaccatctgctgctgaccgcggcatggaccgacgcgcggtca
aagatcaccgacatcggacgtcttgccgggctgctcgagaggtcgcagacgcatctcgtc
caccgcgtcctcgaccgcgtctccccgctcgcggtgccggtcctgctcgaagccggcaag
gagcgcgtgttcggcgcggccgacgatgcactgctgatcgaggcggatgcgctggcggaa
gcggcgatgcggctcgactga

DBGET integrated database retrieval system