Polymorphobacter megasporae: KTC28_08105
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Entry
KTC28_08105 CDS
T08573
Symbol
pnp
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
pmea
Polymorphobacter megasporae
Pathway
pmea03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pmea00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
KTC28_08105 (pnp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pmea03019
]
KTC28_08105 (pnp)
03016 Transfer RNA biogenesis [BR:
pmea03016
]
KTC28_08105 (pnp)
Enzymes [BR:
pmea01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
KTC28_08105 (pnp)
Messenger RNA biogenesis [BR:
pmea03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
KTC28_08105 (pnp)
Transfer RNA biogenesis [BR:
pmea03016
]
Prokaryotic type
tRNA degradation factors
KTC28_08105 (pnp)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
S1
PNPase
KH_1
S1_RRP5
OB_RRP5_4th
KH-I_KHDC4-BBP
S1_2
Motif
Other DBs
NCBI-ProteinID:
UAJ11612
LinkDB
All DBs
Position
1732802..1735129
Genome browser
AA seq
775 aa
AA seq
DB search
MFTIHKQEVMWGGRKLTLETGHIARQADGAVLATYGDTVVLCAVTAAKSVKEGQDFFPLT
VHYQEKFSAAGRIPGGFFKRERGATEHETLTSRLIDRPIRPLFPEGFYNEVLIIAQVLSY
DGENEADIVALVAASAALTLSGVPFMGPLAAARVAYVDGQYVLNPTKTQIKEGSLELIAA
GTRDAILMVESEAKELSEEVMLGAVMFAHNESKPVIEAIIKLAEAGAKDPWELKGAGDQS
SMIDQIKGVAGAAISDAYKIIAKADRQSALGVAKAKVKDLFAGSAPAEALKASKLVKKIE
AGIVRTQILKDGIRIDGRDTKTVRPIEAMVGFLPRTHGSALFTRGETQAIVSTTLGTSDA
EQMIDGLDGLRYERFMLHYNFPPYSVGEVGRFGAPSRRDIGHGKLAWRAINPLLPAKEDF
PYTIRVLSDITESNGSSSMATVCGASLALMDAGVPLVRPVAGIAMGLILEGKDFAVLSDI
LGDEDHLGDMDFKVAGTSEGVTALQMDIKVAGITEEIMKVALGQAKAGREHILGEMAKAL
DTTRTEMSAHAPRIESFQIDKSKIRDVIGTGGKIIREIVATTGAKVNIEDDGTVKIASSD
PAQIEAAKAWIMGITQEAEVGKIYTGKVVSMVDFGAFVNFMGSKDGLVHISEIKNERVAK
VSEVLTEGQPVKVKVLGIDDRGKVRLSMRLVDQETGAEIADTRPPREDGPDRAPRSDRGP
RRDGGDRGGNRGGGGGDRGPRRDGGSSDRGPRPERAAEPEGEPTFAPSFITGDRD
NT seq
2328 nt
NT seq
+upstream
nt +downstream
nt
atgttcacgatccacaagcaggaagtcatgtggggcggccgcaagctgaccctcgagacc
gggcacatcgcccgccaggccgacggcgcggttctcgcgacgtacggcgacaccgtcgtt
ctttgcgccgtcactgcggcgaagtcggtcaaggaaggccaggacttcttcccgctgacc
gtccactaccaggagaagttctccgccgccggtcgcattcccggcggcttcttcaagcgc
gagcgcggtgccaccgagcacgagacgttgacgtcgcgcctgatcgaccgcccgatccgc
ccgctgtttcccgagggcttctacaatgaggtcctgatcatcgcgcaggtcctgtcgtac
gacggtgagaacgaggccgacatcgtcgcgctcgtcgccgcctccgccgctctgacgctg
tcgggcgttccgttcatgggtccgctcgccgccgcgcgcgtcgcctatgtcgacggccag
tatgtcctcaacccgaccaagacccagatcaaggaaggcagcctcgagctgatcgccgcg
ggcacccgcgacgccattctcatggtcgaatccgaagccaaggagctgtcggaagaagtc
atgctcggcgcggtgatgttcgcgcacaacgagtcgaagccggtgatcgaggcgatcatc
aagcttgccgaagccggtgccaaggatccttgggaactcaagggcgcaggcgaccagagc
tcgatgattgaccagatcaagggtgtcgccggggccgcgatctccgacgcgtacaagatc
atcgccaaggccgaccgccagtcggcgctcggtgtcgccaaggcgaaggttaaggacctg
tttgccggctcggctccggccgaggcgttgaaggcatcgaagcttgtcaagaagatcgag
gccggcatcgtccgcacccagatactcaaggacggcatccgcatcgacggccgcgacacc
aagacagtccgtccgatcgaagcgatggtcggcttcctgccgcgcacccacggctcggcg
ctgttcacccgcggcgagacccaggcgatcgtgtcgacgacgctcggcacctccgacgcc
gagcagatgatcgatggcctcgacgggctgcgctacgagcgcttcatgctccactacaac
ttcccgccgtactcggtaggtgaagtcgggcgcttcggtgctcccagccgccgcgacatt
ggtcacggcaagctggcgtggcgcgcgatcaacccgctgctgccggccaaggaagacttc
ccgtatacgattcgcgtcctgtcggacatcaccgagtcgaacggctcgtcgtcgatggcg
accgtctgcggcgcgtcgctggcactgatggacgcgggcgttcccctcgttcgtccggtc
gcgggtattgcgatgggcctgatcctcgaaggcaaggatttcgccgtgttgagcgacatc
ctcggtgacgaggatcatctcggcgacatggacttcaaggttgcaggtaccagcgagggc
gtcaccgcgctccagatggacatcaaggtcgccggcatcaccgaggagatcatgaaggtc
gcgctcggccaggcgaaggccggccgcgagcacatcctcggcgagatggcgaaggcgctc
gacacgacccggaccgagatgtcggcgcacgcgccgcgcatcgagagcttccagatcgac
aagtcgaagatccgcgacgtcatcggcaccggcggcaagatcattcgtgagatcgtcgcc
acgaccggtgccaaggtcaacatcgaggacgacggcacggtcaagatcgcgtcgtccgat
ccggcgcagatcgaggccgccaaggcgtggatcatgggcatcacccaggaagccgaagtc
ggaaagatttacaccggcaaggtcgtctcgatggtcgacttcggcgcgttcgtgaacttc
atggggtcgaaggacggcctcgtccacatctccgaaatcaagaacgagcgcgtcgccaag
gtcagcgaagtcctgaccgagggccagccggtcaaggtcaaggtgctcggcatcgacgac
cgcggcaaggtccgcctgtcgatgcgcctcgtcgaccaggagaccggtgccgaaatcgcc
gacacccgtccgccgcgtgaggacggtcccgaccgtgccccgcgcagcgaccgcggcccg
cgccgtgacggtggcgatcgcggcggcaaccgcggcggtggtggtggtgatcgcggcccg
cgtcgcgatggcggctcgagcgaccgtggcccgcgccccgagcgtgcagccgagcccgag
ggcgagccgacgttcgcgccgagcttcatcaccggcgaccgcgactaa
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