Polymorphobacter megasporae: KTC28_09435
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Entry
KTC28_09435 CDS
T08573
Symbol
serS
Name
(GenBank) serine--tRNA ligase
KO
K01875
seryl-tRNA synthetase [EC:
6.1.1.11
]
Organism
pmea
Polymorphobacter megasporae
Pathway
pmea00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
pmea00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
KTC28_09435 (serS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
pmea01007
]
KTC28_09435 (serS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pmea03016
]
KTC28_09435 (serS)
Enzymes [BR:
pmea01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.11 serine---tRNA ligase
KTC28_09435 (serS)
Amino acid related enzymes [BR:
pmea01007
]
Aminoacyl-tRNA synthetase
Class II (C/G)
KTC28_09435 (serS)
Transfer RNA biogenesis [BR:
pmea03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
KTC28_09435 (serS)
Prokaryotic type
KTC28_09435 (serS)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2b
Seryl_tRNA_N
Motif
Other DBs
NCBI-ProteinID:
UAJ08629
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All DBs
Position
1981893..1983179
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AA seq
428 aa
AA seq
DB search
MHDIKAIRADPAAFDAGLARRGVQAASDLLISGDAELRSLRQLEEAAQARRKEVSREVGQ
AMAKGDIALADELRARVIHDLAPATVEVREKRQAVIETELEAEISGLPNIPAPDVPDGLD
ESGNVVVHTRGTLPTFDFTPREHDTLALKFGYDPDTAATIAGARFAVLKGPLARLHRALG
QFMIDRHVETGGFTEVAPPLLVLEKAVFGAGQLPKFADDLFKTTDGRYLISTAEVSLTNL
VREKIVDAADLPLRFTALTPCFRSEAGSAGRDTRGLIRQHQFDKVELVAIVADAEAAAAE
HERMTAHAEAILDALGLPYRRMLLCAGDMGFSARKTYDLEVWLPGQGAYREISSCSDCGD
FQARRMDARYKTRGEKGTKFVHTLNGSALAVGRTLVAVIENYQRADGSVAVPEVLAPYMG
GVTELVPN
NT seq
1287 nt
NT seq
+upstream
nt +downstream
nt
atgcacgacatcaaagccatccgcgccgacccggccgccttcgacgcgggactcgcgcgg
cggggggtacaggcggcaagcgatctccttatctctggtgatgccgaacttcgtagtttg
cgtcagttagaagaggctgctcaggcccgtcgcaaggaggtttcgcgcgaggtaggacag
gcaatggcgaagggagatatcgcccttgccgacgaattgcgtgcccgcgttattcacgat
cttgcccccgcgactgtcgaggttcgtgagaagcggcaggccgtaatcgagaccgagctt
gaagccgagatttccggcctccccaacatccctgcccccgacgtcccggacggtctcgac
gaatctggcaacgtcgtcgtccacacgcgcggcaccctcccaaccttcgacttcaccccc
cgcgaacacgacaccctcgcgctgaaattcggctacgaccccgataccgccgcgaccatc
gccggtgcgcgtttcgctgtcctcaagggtccgctcgcccggctccaccgcgcgctcggg
cagttcatgatcgaccggcatgtcgagaccgggggctttaccgaggtcgcgccgccgctg
ctcgtgctcgagaaggcggtgttcggcgcggggcaattgccgaagttcgccgatgatttg
ttcaagacgaccgacgggcgctacctgatctcgacggcggaagtgtcgctgaccaacctc
gtccgcgagaagatcgtcgacgccgccgacctgccgctgcgcttcaccgcgctgaccccg
tgcttccggtcggaggccgggtcggcggggcgcgacacgcgcgggctgatccgccagcac
cagttcgacaaggtcgagctcgtggcgatcgtcgccgatgccgaggccgccgctgccgag
cacgaacgcatgaccgcgcacgccgaggcgatcctcgatgcgctcgggctgccgtatcgc
cggatgctgctgtgcgcaggcgacatggggttttcggcgcgcaagacctacgacctcgag
gtctggctgccggggcagggcgcgtatcgcgagatttcgagctgttcggactgcggcgac
tttcaggcgcggcggatggacgcccgctacaagacgcgcggcgagaagggtacgaagttc
gtccacacactcaacggctcggcgctcgcggtcgggcggacgctggttgcggtgatcgag
aattatcagcgggcggatgggtcggtcgcggtgcccgaggtgttggctccgtacatgggc
ggggtgacggagttggtgccaaactaa
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