Glacieibacterium megasporae: KTC28_13405
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Entry
KTC28_13405 CDS
T08573
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
pmea
Glacieibacterium megasporae
Pathway
pmea03030
DNA replication
pmea03430
Mismatch repair
pmea03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pmea00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
KTC28_13405 (dnaE)
03430 Mismatch repair
KTC28_13405 (dnaE)
03440 Homologous recombination
KTC28_13405 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pmea03032
]
KTC28_13405 (dnaE)
03400 DNA repair and recombination proteins [BR:
pmea03400
]
KTC28_13405 (dnaE)
Enzymes [BR:
pmea01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
KTC28_13405 (dnaE)
DNA replication proteins [BR:
pmea03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
KTC28_13405 (dnaE)
DNA repair and recombination proteins [BR:
pmea03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
KTC28_13405 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
DUF655
Motif
Other DBs
NCBI-ProteinID:
UAJ09308
LinkDB
All DBs
Position
2862070..2865513
Genome browser
AA seq
1147 aa
AA seq
DB search
MPHAPFVHLRVQSAYSMLEGAMTPDAIAAACRTMKLPAVALTDRNNMFGAMEFSEACRGQ
GVQPIIGALVAFERPGSRTPAGRMTCDWLVLLAQDKTGYDNLIAIVSDAHLGCDAADEPH
LTLAELEGRTDGLIALTAGPEGALARLLAEGQDAAAYADALVALFPDRLYIELSRSGDPI
EIKAEAALVELAHARDLPIVATNPARFIDAKVHAAHDVMLCIADGAYVETTERRRSNPEH
WLKPAKTMLELFADLPEACATTLVVAQRCAYKAPSREPILPSLAGDPAAEVSALAEQATA
GLDRRLEALGLSGDAATPYRERCVFELGVIARMGFPGYFLIVADFIQWAKAQGIPVGPGR
GSGAGSVVAWALTITDLDPLQHGLLFERFLNPERVSMPDFDIDFCETRRGEVIRYVQQRY
GRGQVAQIITFGKLKARAVLKDVGRVLQMPYGQIDRIAKLIPNHPTDPWTLARAINGVSE
LVAERDRDPKVAHLLEIALKLEGLPRHSSTHAAGVVIGDRPLSQLVPMYRDPRSDMPVTQ
FDMKWVEKAGLVKFDFLGLKTLSVLERARELLLAKGVVLDLAALPLDDEETYRLIARGDT
VGVFQFESEGMRRALTQVRPDCFADIIALGALYRPGPMENIPSFGRRKNGEEVPDYLHLS
LEGVLKETYGVIIYQEQVMQIAQILAGYSLGEADLLRRAMGKKIAAEMQAQKARFADGAA
KNGVDKRQAAAIFELVNKFAGYGFNKSHAAAYALVSYHTAWLKTHHPVEFYAASMAFDIT
NTDRLAIFVDDMRRMAVPCLPPCINASDADFTVEDSGVRFGLAALKSVGEKAMAGIAEER
ARGGRFTGLADFSRRVDPKLLNKRQLEALVGGGAFDGIEKNRAGVHALAEAILGTAQNAA
AARESAQVAMFGESHDRGLAMLVPPGMGWTLAETMAHEKDAFGFYFSGHPVEGFAHILTA
HGARTYAQCATVEPPPGGGRLPATMAGLIEDLKWRTPQNGKSDKYLLLTMSDASGQYVAS
CFDDAAQAQIVAAHAAADAVLVNAELMWRPGEDTPRVTIRGVKPLAALAKASRCRLTVEL
SGAGIDALAGLVSSRRGGKGEIVALVPLGGGGRANLSLGMDFAIDNEVVAKVERLRGVAG
VRLMAAS
NT seq
3444 nt
NT seq
+upstream
nt +downstream
nt
atgccccacgctccgttcgtccacctccgcgtccagtcggcgtattcgatgctcgaaggc
gcgatgacgcccgatgcgatcgcggcggcgtgccggacgatgaagctgccggcggtcgcg
ctgaccgatcgcaacaacatgttcggcgcgatggagttttcggaagcgtgccgcgggcag
ggggtccagccgatcatcggcgcgctcgtcgcgttcgagcggccgggctcgcgaaccccg
gcgggacgaatgacgtgcgattggctggtgctgttagcgcaggacaagaccgggtacgac
aacctcatcgccatcgtcagcgacgcgcatctcggctgcgatgccgccgacgagccgcat
ctgacgctcgccgagctcgaaggccggaccgatgggctgatcgcgctgacggcggggccc
gagggtgcgctcgcgcggctgctcgccgaggggcaggacgcggccgcctatgcagacgcg
ctcgtcgcgctgttccccgaccggctgtatatcgagttgagccggagcggcgatccgatc
gagatcaaggccgaagccgcactcgtcgagctcgcccacgcccgcgacctgccgatcgtc
gcgaccaatccggcgcggttcatcgacgccaaggtccacgccgcgcacgacgtcatgctg
tgcatcgccgacggtgcctatgtcgagacgaccgagcggcggcggtcgaaccccgagcat
tggctcaagccggcgaagacgatgctcgagctcttcgccgacctgcccgaggcgtgcgcg
acgacgctcgtcgtggcgcagcgctgtgcgtacaaggcgccgtcgcgcgagccgatcctg
ccgagcctcgcgggtgatcccgccgccgaagtgagcgcgctcgccgagcaggcgacggcg
gggctcgaccggcggctcgaggcgctcggcctgagcggcgacgcggcgacgccctaccgt
gagcgctgcgtattcgagctcggcgtcatcgcgcggatgggcttcccgggctacttcctg
atcgtcgccgacttcatccaatgggcgaaggcgcagggcattccggttggtcccgggcgc
ggatccggcgcgggatcggtcgtcgcctgggcgctgacgatcaccgacctcgacccgttg
cagcacggcctgctgttcgagcgcttcctcaaccccgagcgtgtgtcgatgcccgacttc
gacatcgacttctgcgaaacccgccgcggcgaggtcatacgctatgtccagcaacgctac
gggcgtgggcaggtcgcgcagatcatcaccttcgggaaattgaaggcgcgcgcggtcctc
aaggacgtcgggcgggtgctgcagatgccgtacgggcagatcgaccgcatcgccaagctg
atcccaaatcatccgaccgatccgtggacgctggcgcgcgcgatcaacggcgtgtccgag
ctggtggccgagcgcgaccgcgatcccaaggtcgcgcatttgctcgagatcgcgctcaag
ctcgaaggcctgccgcgccactcgtcgactcacgctgccggcgtcgtcatcggcgaccgg
ccgctgagccagctcgtgccgatgtaccgcgacccgcgctcggacatgccggtgacccag
ttcgacatgaagtgggtcgagaaagccgggctggtcaagttcgacttcctcgggctcaag
acgctgtcggtactagaacgcgcccgcgaactgctgctggcgaagggcgtcgtgctcgac
ctcgccgcgctcccgcttgacgacgaggagacctaccggctgatcgcgcgcggcgatacc
gttggggtgttccagttcgaatccgagggcatgcggcgcgcgctgacacaggtccggccc
gactgcttcgccgacatcatcgcgctcggcgcgttgtaccgcccggggccgatggagaat
atcccgagcttcggccgccgtaagaatggcgaggaggtgcccgactacctccatctgagc
ctcgagggcgtcctcaaggaaacctacggcgtcatcatctaccaggaacaggtgatgcag
atcgcccagatcctcgctggctacagcctcggcgaggccgacctgctgcgccgtgcgatg
ggcaagaagatcgccgccgagatgcaggcgcaaaaggcgcgcttcgccgatggcgcggcg
aagaacggcgtcgataagcgccaggcggcggcgatctttgagctcgtcaacaagttcgcc
ggatacggtttcaacaagagtcacgccgcggcgtacgcactcgtcagctaccacaccgcg
tggctcaagacgcaccatccggtcgagttctacgccgcgtcgatggcgttcgacatcacc
aacaccgaccggctggcgatcttcgtcgacgacatgcggcggatggcggtgccgtgcctg
ccgccgtgcatcaacgcgagcgacgccgactttactgtcgaggacagcggcgttcgcttc
gggctggcggcgctcaagagcgtcggcgagaaagcgatggcggggatcgccgaggagcgc
gcgcgcggcggccggttcaccgggctcgccgacttctcgcgccgggtcgacccgaagttg
ctcaacaagcgccaattggaggcactcgtcggcggcggcgcattcgacgggatcgagaag
aaccgcgccggggtacacgcgctcgccgaggcaatcctcggcaccgcgcagaacgccgcc
gccgcccgcgagagcgcgcaggtcgcgatgttcggcgagagccacgaccgcgggctggcg
atgctcgtgccgccggggatgggctggacccttgccgagacgatggcacacgagaaggat
gcgttcggcttctacttctcgggccacccggtcgagggcttcgcgcatattctcaccgcc
cacggcgcacgaacctatgcccagtgcgcgacggtcgagccaccccccgggggcgggcga
ctgccagcgacgatggcggggctgatcgaggacctcaagtggcggaccccgcagaacggc
aagagcgacaagtatctgctgctgacgatgtccgacgcgagcggccagtatgtcgcgagc
tgcttcgacgacgccgcgcaggcacagatcgtcgccgcgcatgccgccgccgacgcggtg
ctggtcaacgccgagctgatgtggcggcccggcgaggacaccccgcgcgtgacgatccga
ggggtcaagccgctcgccgcgctggcgaaggcgtctcgctgccgcctgacggtcgagctg
tcaggggcagggatcgacgcgctcgcagggctggtgtcgagcaggcgagggggcaaaggc
gagatcgtcgcgctggtcccgctcggcggcggcggccgcgcgaacctgtcgctcggcatg
gattttgcgatcgacaacgaggtcgtggcgaaggtcgaacggctgcgcggggtcgccggg
gtacggttgatggcggcgagttag
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