Glacieibacterium megasporae: KTC28_14150
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Entry
KTC28_14150 CDS
T08573
Name
(GenBank) class I SAM-dependent RNA methyltransferase
KO
K03215
23S rRNA (uracil1939-C5)-methyltransferase [EC:
2.1.1.190
]
Organism
pmea
Glacieibacterium megasporae
Brite
KEGG Orthology (KO) [BR:
pmea00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pmea03009
]
KTC28_14150
Enzymes [BR:
pmea01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.190 23S rRNA (uracil1939-C5)-methyltransferase
KTC28_14150
Ribosome biogenesis [BR:
pmea03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
KTC28_14150
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_U5-meth_tr
Methyltransf_25
MTS
TRM5-TYW2_MTfase
Motif
Other DBs
NCBI-ProteinID:
UAJ09443
LinkDB
All DBs
Position
complement(3026247..3027518)
Genome browser
AA seq
423 aa
AA seq
DB search
MRGRADCRGPARGACRSARGVVRVTDWIDIVRMAARGDGVTADGRFVPATVAGDRVRFDP
FEIAPGPDHATPPCRHFPECGGCQLQHVTDPAYERWVAARIMSALDAAKVAVGAIEPVSL
SPSRSRRRASLRAVKRGKTLTLGFNADASHRIVDMHECWVLTPGLFALVAPLRGLLDAAL
KDGEGAGVTLTESESGVDLLLANVAARSLTEIERLNAFAAANDLARLSVEGPDGVETVTE
ARPPVLRFGGVPVILPPAPFLQATREGEAALQAAVIAAAGGAGAVADLFCGLGTFALPLA
RTAKVLAADGSMSATAALASAARLGGARVFVEHRDLFRKPLNGPELARFDAVVFDPPRAG
AVAQVAELAASKVPVIVAVSCNPNTFARDAAMLVEGGYRLERLWPVGQFRWSTHVELVAK
FVR
NT seq
1272 nt
NT seq
+upstream
nt +downstream
nt
atgcggggcagggctgattgccgaggacctgcccgaggcgcttgtcgcagtgctcgcggg
gttgtccgcgtgaccgactggatcgacatcgtccgcatggcagcgcgcggcgacggcgtc
accgccgacgggcgcttcgtgcccgcgacagtagccggtgaccgggtccgcttcgatccg
ttcgagatcgcgcccgggcccgaccacgcgacgccgccgtgccgccacttccccgagtgc
ggcggctgccagctccagcacgtcaccgacccggcgtacgagcgctgggtcgcggcgcgg
atcatgtcggcgctcgacgccgccaaggtcgcagtcggcgcgatcgagccggtttccctg
tcgccgtcgcggagccgccgccgcgcttcgctgcgcgcggtcaagcggggcaagacgctg
acgctcggcttcaacgccgacgcgagccatcgcatcgtcgacatgcacgaatgctgggtc
cttacccccgggctgttcgcgcttgtcgcgccgttgcggggcctgctcgacgccgcgctc
aaggacggtgaaggtgcgggggtgacgttgaccgagagcgagagcggggtcgacctgctg
ctcgccaatgtcgccgcgcgcagcctgaccgagatcgagcggctcaacgccttcgccgcc
gccaacgacctcgcgcgcctgtcggtcgaggggcccgacggggtcgagacggtgaccgaa
gcgcgcccgccggtgctgcgctttggcggtgttcccgtgatcctgccgcccgcgccgttc
ctccaggcgacacgcgagggagaggcggcgctgcaagcagcggtgatcgccgcggccggc
ggggcgggggcggtcgccgacctgttctgcgggctcgggacattcgcactgccgctcgcc
cggacggcgaaggtgctcgcggcggacgggtcgatgagtgccactgcggcgcttgcgtcc
gctgcgcgacttggtggggcgcgggtgttcgtcgagcatcgcgacctgttccgcaagccg
ctgaacgggcccgagttggcgcggttcgacgcagtcgtgttcgatcctccgcgcgccgga
gcggtggcgcaggtcgccgaactcgcggcgagcaaggtcccggtcatcgtcgcggtatct
tgcaatcccaacaccttcgcgcgcgatgcggcgatgctggtcgagggcggctaccggctc
gaacggctctggccggtaggtcagtttcgctggtcgacgcatgtcgagctagtggcgaag
ttcgttcggtga
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