Glacieibacterium megasporae: KTC28_18080
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Entry
KTC28_18080 CDS
T08573
Symbol
dapF
Name
(GenBank) diaminopimelate epimerase
KO
K01778
diaminopimelate epimerase [EC:
5.1.1.7
]
Organism
pmea
Glacieibacterium megasporae
Pathway
pmea00300
Lysine biosynthesis
pmea00470
D-Amino acid metabolism
pmea01100
Metabolic pathways
pmea01110
Biosynthesis of secondary metabolites
pmea01120
Microbial metabolism in diverse environments
pmea01230
Biosynthesis of amino acids
Module
pmea_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
pmea00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
KTC28_18080 (dapF)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
KTC28_18080 (dapF)
Enzymes [BR:
pmea01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.7 diaminopimelate epimerase
KTC28_18080 (dapF)
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Gene cluster
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Motif
Pfam:
DAP_epimerase
TAL_effector
Motif
Other DBs
NCBI-ProteinID:
UAJ10144
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All DBs
Position
3881493..3882284
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AA seq
263 aa
AA seq
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MLRPFIKMHGLGNDFVVFDARSQPLALTPAQVVAVADRHTGIGCDQLIVIEPSTVATALM
RIWNGDGGEVEACGNAARCVATLLGTSATIATAGGILDATSTAGSASVTYPPPQFDWDAI
PLAYAVDTRDVPVAWDSLEHGQAVNVGNPHIVFFVADANAVPLADLGPLIEHDALFPERV
NVGVAHVVDRGHIVLRVWERGAGLTLACGTGAVACAVAAMRRGLVDPRVMVTLPGGDLTV
EWHGAEVTLAGPAVTSFTGTIDL
NT seq
792 nt
NT seq
+upstream
nt +downstream
nt
atgctccgccctttcatcaagatgcacggcctcggcaacgacttcgtcgtgttcgacgcg
cggagccagccgctggcgctgacccccgcgcaggtcgtcgcggtcgccgatcgccacacc
gggatcggctgtgaccagctgatcgtgatcgagccgagcaccgtcgccaccgcactgatg
cggatctggaacggcgacggcggcgaggtcgaagcctgcggcaacgccgcgcgctgtgtc
gcgacgctgctcggaacgagcgcgacgattgcgaccgcaggcggcatcctcgatgcgact
tcgaccgcggggagtgcgagcgtgacttacccgccgccgcaattcgactgggacgcgatc
ccgctcgcctatgcggtcgacacgcgcgacgtgccggtggcgtgggacagcctcgaacac
gggcaggcggtcaacgtcggcaacccgcacatcgtcttcttcgtcgccgacgcgaacgcg
gtgccgctcgccgacctcggccctctgatcgagcatgacgcgctgttccccgagcgcgtc
aacgtcggcgtcgcgcatgtcgtcgaccggggccatatcgtgctcagggtgtgggagcgc
ggcgccggattgacgctggcgtgcggcactggtgcggtggcgtgcgcggtcgcggcgatg
cggcgcgggctggtcgatccgcgagtcatggtgacgctgccgggcggcgatctcacggtg
gagtggcacggcgcggaggtgacgctggcagggcctgccgtgaccagtttcaccgggacg
atcgacctgtga
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