Polymorphobacter megasporae: KTC28_18195
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Entry
KTC28_18195 CDS
T08573
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
pmea
Polymorphobacter megasporae
Pathway
pmea03030
DNA replication
pmea03410
Base excision repair
pmea03420
Nucleotide excision repair
pmea03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pmea00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
KTC28_18195 (polA)
03410 Base excision repair
KTC28_18195 (polA)
03420 Nucleotide excision repair
KTC28_18195 (polA)
03440 Homologous recombination
KTC28_18195 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pmea03032
]
KTC28_18195 (polA)
03400 DNA repair and recombination proteins [BR:
pmea03400
]
KTC28_18195 (polA)
Enzymes [BR:
pmea01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
KTC28_18195 (polA)
DNA replication proteins [BR:
pmea03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
KTC28_18195 (polA)
DNA repair and recombination proteins [BR:
pmea03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
KTC28_18195 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
KTC28_18195 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
5_3_exonuc
DNA_pol_A_exo1
DprA_N
HHH_2
Motif
Other DBs
NCBI-ProteinID:
UAJ10164
LinkDB
All DBs
Position
complement(3910737..3913487)
Genome browser
AA seq
916 aa
AA seq
DB search
MAKQHLYLVDGSGYIFRAYHRLPPLTNPDGTMVNAVYGFTTMLWKLIEELNKAEAPTHLA
VIFDAGSITFRNDMYDQYKAHRPPPPDDLVPQFPLIRDAVRAFSVPCIEQPGFEADDIIA
SYALAAIAAGFDVSIVSSDKDLMQLVQPGLDLYDTMKNCRVNREDVIEKFGVPPEQLGEV
LALMGDSVDNVPGVRGVGPKGAAELIQQFGTVEAMLARLDEVKKSKLRDNLAASADMARL
SRELVRLKDDLPLEIPLDELTLREPPHAPLAAFLARHGFRSLLAKLGREVEAAHAPVVED
APAAPFDHKKYECVTTLDRLDWWLAEATRRGVVAVDSETTDLDPVRADLVGLSLALEPGL
ACYIPVGHKIGDGLLAEPVDQLDRATVIERLNPVFANPAVLKVGQNLKYDMIVFRRHGAA
EIAPYDDTMLMSFALDAGRWNHGVEDLSTRHLGHTPIAVKELTGTAKSRISFDHVALDRA
TEYAAEDADVTLRLHGKFAARLWREEVTTIYRTVDAPLIPVIADMEMAGIKVDRAALAGL
SAAYEIEIAGLETQIHDMAGHKFTIGSPKQLGEVLFDKLGHASGKKSGKTGAFATDVTEL
ERLAASGVDIAARVLDWRQLTKLKSTYTDALQAQINPATGRVHTCFGLANASTGRLSSTD
PNLQNIPIRTEMGRRIRYAFVAEPGHVIMAADYNQIELRLVAHIADVPELKQVYAEGGDV
HNLTAQEVFGEVTRDTRNRAKTINFSIIYGISAFGLAQRLGIDRGEAARYIDLYFSRFPG
IRNYMAETIAFARDHGFVTTLFGRKANVPMIASKVMGERQNAERQAVNARVQGTAADIIK
RAMARMPGALAAAGLTGTRMLLQVHDELVFEVPDAEVEAATAVIRATMAHSHTPAVDLSI
PLGVEIGTGVSWGDAH
NT seq
2751 nt
NT seq
+upstream
nt +downstream
nt
atggcaaagcagcacctctacctcgtcgacggctcgggttatatcttccgcgcctatcat
cggctcccgccgctaaccaaccccgacgggacgatggtcaacgcggtctatggcttcacg
acgatgctgtggaagctgatcgaggagctcaacaaggcggaggccccgacccacctcgcg
gtgatcttcgacgccggcagcatcaccttccgcaacgatatgtacgaccagtacaaggcg
caccgcccgccgccgcccgacgacctcgtcccgcagttcccgctgatccgcgacgcggtc
cgcgctttctcggtcccgtgcatcgagcagccgggcttcgaagccgacgacatcatcgcg
agctatgcgctagccgcgatcgccgccgggttcgatgtttcgatcgtgtcgtcggacaag
gacctgatgcagctcgtccagccggggctcgacctttatgacacgatgaagaactgccgg
gtcaaccgcgaggatgtgatcgagaagttcggtgtcccccccgaacagctcggcgaggtc
ctcgcgctgatgggcgacagcgtcgataacgtccccggggtccgcggcgtcgggccgaag
ggcgcggctgagctgatccagcagttcggtacggtcgaggcgatgctggcgcggctcgac
gaggtcaagaagtccaagctgcgcgacaaccttgcggcgtcggccgacatggcccgcctg
tcgcgcgaactcgtccggttgaaagacgacctgccgctcgagatcccgctcgacgaactg
acgctgcgcgagccgccacacgccccgcttgccgcgttcctcgccaggcacggcttccgc
tcgctgctggcgaagctcgggcgcgaggtcgaggcggcgcatgccccggtcgtcgaggac
gcccccgccgcgccgttcgaccacaagaagtacgagtgcgtcacgacgctcgaccggctc
gactggtggctcgccgaggcgacgcggcgcggggtcgtcgcggtcgactccgagaccacc
gacctcgacccggtccgcgccgaccttgtcgggctgagcctcgcgctagaacccgggctc
gcctgctatatccccgtcggccataagatcggcgatggcctgctcgccgaacccgtcgac
cagctcgaccgcgcgacggtgatcgagcggctcaacccggtttttgccaacccggcggtc
ctcaaggtcggccagaacctgaagtacgacatgatcgtcttccgccgccacggggcggcc
gagatcgcaccatatgacgacacgatgctgatgagcttcgcgctcgatgccgggcggtgg
aaccacggtgtcgaggacctgtcgacccgccacctcggccacaccccgatcgccgtcaag
gagctgaccggcaccgccaagtcgcggatcagtttcgaccatgtcgcgctcgaccgcgcc
accgaatacgccgccgaggatgccgacgtcacgctgcggcttcacggcaagttcgccgcg
cgactgtggcgcgaggaggtcacgaccatctaccggaccgtcgacgcgccgctgattccg
gtgatcgccgacatggagatggccgggatcaaggtcgaccgcgccgcgcttgccggcctg
tcggcggcgtacgagatcgagatcgccgggctcgaaacgcagatccacgacatggcgggc
cacaagttcaccatcggctcacctaagcagcttggcgaggtgctgttcgacaagctcggc
catgcctcgggcaagaagtcgggcaagaccggggcgttcgcgaccgacgtcaccgagctc
gaacgccttgccgcgagcggcgtcgacatcgccgcgcgggtgctcgactggcgccagctg
accaagctgaagtcgacctacaccgacgcgctccaggcgcagatcaaccccgcgacgggg
cgcgtccacacctgcttcggccttgccaatgcgagcaccgggcggctgtcgtcgaccgac
cccaaccttcagaacatcccgattcggaccgagatgggccggcggatccgctacgccttc
gtcgccgagccggggcacgtcatcatggccgccgactataaccagatcgagctgcggctg
gtcgcgcacatcgccgacgtccccgaactgaagcaggtctatgccgagggcggcgacgtc
cataacctgaccgcgcaagaggtgttcggcgaggtcacgcgcgacacccgcaaccgcgcc
aagacgatcaacttctcgatcatctacggcatctcggcgttcgggctggcgcagcgcctc
ggcatcgatcgcggcgaggcggcgcgctacatcgacctgtacttcagccgcttccccggc
atccgcaactacatggccgaaaccattgccttcgcccgcgaccacggcttcgtcacgacg
ctgttcgggcgcaaggcgaacgtcccgatgatcgcgtcgaaggttatgggcgagcgccag
aacgccgagcgccaggcggtcaacgcccgcgtccaagggaccgccgccgacatcatcaag
cgcgcgatggcgcggatgccgggggcgcttgcggcggccgggctgaccggcacgcggatg
ctcctccaggtccacgacgaactggtgttcgaggttcccgacgccgaggtcgaggcggcg
acggcggtgatccgcgcgacgatggcgcactcgcacacccccgcggtcgacctgtcgatt
ccgctcggggtggagatcgggaccggggtcagttggggcgacgcgcactga
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