Polyergus mexicanus: 138931666
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Entry
138931666 CDS
T10742
Name
(RefSeq) uncharacterized protein isoform X1
KO
K12823
ATP-dependent RNA helicase DDX5/DBP2 [EC:
5.6.2.7
]
Organism
pmec Polyergus mexicanus
Pathway
pmec03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pmec00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
138931666
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pmec03041
]
138931666
03009 Ribosome biogenesis [BR:
pmec03009
]
138931666
Enzymes [BR:
pmec01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
138931666
Spliceosome [BR:
pmec03041
]
Complex A
U1 snRNP components
U1 related factors
138931666
Complex B
138931666
Ribosome biogenesis [BR:
pmec03009
]
Eukaryotic type
Pre-60S particles
Helicases
138931666
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
ERCC3_RAD25_C
Cas3-like_C_2
Motif
Other DBs
NCBI-GeneID:
138931666
NCBI-ProteinID:
XP_070148766
LinkDB
All DBs
Position
Unknown
AA seq
706 aa
AA seq
DB search
MYNGYSQTQSSYRTRGNRDHANRTGGSGGTYWNSQQQSQKEYGAKKQNRKTPGDLLKKPS
WDLSKLPTITKNLYIPHINVLNRTPDEISTYHAGKEITVKGNNTPSPIQAFEESNFPDYV
MEEIKKQGFAEPTAIQAQGWPIALSGRDLVGIAQTGSGKTLAYILPATVHINHQPRLNRG
DGPIVLILAPTRELAQQIQTVARDFGSSSCIRNTCIFGGSPKGPQARDLERGVEICIATP
GRLIDFLEKGTTNLRRCTYLVLDEADRMLDMGFEPQIRKIIEQIRPDRQVLMWSATWPKE
VQALAEDFLTDYIQINIGSLTLAANHNIRQIIEICQEHEKELKLSQLLREIGTERGSKMI
IFVETKKKVDDITKTIKREGWSAISIHGDKSQPERDYVLSEFRNGKTMILVATDVAARGL
DVEDVKYVINFDYPNSSEDYIHRIGRTGRCQSAGTAYAYFTPNNARQAKELIAVLEEAGQ
SINPQLADIANSMRNQYGKGRQRWSHGRSNKDNNPHGSPRNNISPTISSWQNQHIPHQTN
QHVHSQMAQEKMVTRHQRNSGYQVNRQNNYQPQHSYQQQQRQSTNNYQNGYQAANSTCQP
AHQTASAPRYQGRTTGYQGNRFQNRQNGFSGGQNGPNVYSMPPPFMMPSGGPADSGIQNL
VNNKFFQTNRPPPNAGACAYQSMGHYSQFQAVPTYGYPYPPTPVQQ
NT seq
2121 nt
NT seq
+upstream
nt +downstream
nt
atgtacaacggatactcccaaacgcaaagcagttataggaccaggggaaatcgagaccat
gctaatcgcactggaggaagtggcggaacttactggaacagtcagcaacagagccagaag
gaatatggtgcaaagaaacagaacaggaagactccaggcgatttgttaaagaaacctagt
tgggatctgtccaaattgcctacaataacaaagaatttatatattcctcatataaatgtt
ctgaatagaacacctgatgagattagcacgtatcatgcgggcaaggaaattactgtcaaa
ggcaataatacaccttctccaatccaagcctttgaggagagcaattttccagactatgta
atggaggaaatcaaaaaacaaggatttgccgaacctactgcaattcaagctcagggctgg
ccaattgcacttagtggacgagatcttgttgggattgcacaaactggttctgggaaaacc
ttggcatatatccttccggcaacagtgcatatcaatcatcagcctcgcctcaaccgcggc
gatggtccaattgttctgattctcgctcccacgcgcgaattggcccaacaaattcaaaca
gtagcgcgtgatttcggctcgtcatcgtgcattcgcaatacctgcatcttcggcggctcg
ccaaaggggcctcaagctcgcgatcttgaacgcggggtggaaatttgcatcgcgacaccc
ggcaggttgatcgacttccttgaaaaaggcaccactaatctacgtagatgcacgtatttg
gtattggatgaggccgatcgaatgctggacatgggttttgaaccgcaaatccgcaaaatt
atcgaacagatccggcctgatcgacaggtgctcatgtggtctgccacttggcccaaagaa
gtgcaagctcttgccgaggattttctcaccgattacatccagattaatatcggctctttg
actttggcagccaatcacaatatccgacaaatcatcgaaatctgtcaagaacacgagaaa
gaattgaaactgtcgcaattgttgcgcgaaatcggaaccgaacgcggcagcaagatgatc
atttttgtggagacaaaaaagaaggtggacgatatcacgaagacgatcaaacgcgagggc
tggtcagctatctcgattcatggcgacaaatcgcagccggagcgcgattacgttttgtca
gaatttcgcaatggaaaaactatgattcttgtcgcgaccgatgtggcggcacgcggcttg
gacgtcgaggacgttaagtatgtcattaacttcgattatcctaacagctccgaggactac
atccacaggatcggcagaactggccgctgtcagagcgccggcaccgcctatgcttatttc
acaccgaataacgcgagacaggcaaaagaattgattgcggtgctagaagaagctggtcaa
tctataaatccgcaactggcagacattgcaaattctatgaggaaccaatatggcaaagga
cgacagcgatggagccacggacgaagcaataaagataacaatcctcacggcagtcctagg
aacaatatcagtccgacgataagtagctggcagaatcagcacataccgcaccagacgaac
cagcacgtacatagtcagatggcgcaggagaaaatggtaacgcgtcatcagcgtaacagc
ggttatcaagtcaatcgtcaaaataattatcagccgcagcattcttatcaacagcagcaa
cgacagtccactaacaactatcaaaatggttaccaggcggctaacagcacgtgccagccg
gcacatcaaaccgccagcgcacccagataccaaggtagaaccactggttatcagggtaat
cgttttcaaaatcgacagaacggcttcagcggcggccagaacgggccgaatgtgtattcg
atgccgccgcccttcatgatgccgtccggcgggcccgcggactccgggatacaaaatctc
gtgaataacaagttcttccagactaaccgaccgccgcccaacgccggcgcttgcgcctac
caatcgatgggccattacagccagtttcaagcggtgccgacatacggatacccgtatccg
cccacgccggtgcagcagtga
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