Polyergus mexicanus: 138931678
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Entry
138931678 CDS
T10742
Symbol
Hdac6
Name
(RefSeq) histone deacetylase 6
KO
K11407
histone deacetylase 6 [EC:
3.5.1.98
]
Organism
pmec Polyergus mexicanus
Brite
KEGG Orthology (KO) [BR:
pmec00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
pmec01009
]
138931678 (Hdac6)
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pmec03019
]
138931678 (Hdac6)
04131 Membrane trafficking [BR:
pmec04131
]
138931678 (Hdac6)
03036 Chromosome and associated proteins [BR:
pmec03036
]
138931678 (Hdac6)
Enzymes [BR:
pmec01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.98 histone deacetylase
138931678 (Hdac6)
Protein phosphatases and associated proteins [BR:
pmec01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
138931678 (Hdac6)
Messenger RNA biogenesis [BR:
pmec03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Stress granule specific factors
138931678 (Hdac6)
Membrane trafficking [BR:
pmec04131
]
Autophagy
Aggrephagy
Other aggrephagy associated proteins
138931678 (Hdac6)
Chromosome and associated proteins [BR:
pmec03036
]
Eukaryotic type
Histone modification proteins
HDACs (histone deacetylases)
Class II HDACs
138931678 (Hdac6)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Hist_deacetyl
zf-UBP
zf-UBP_var
Motif
Other DBs
NCBI-GeneID:
138931678
NCBI-ProteinID:
XP_070148790
LinkDB
All DBs
Position
Unknown
AA seq
1172 aa
AA seq
DB search
MTEPIVRSDLFTAAKQLADSEIELIKMIESSSKCERTATNMFENVKKIRKTGKSKNIHPS
AALLAAKREAAQRQLLLGKKSNNSFIRDVYQNAIDAYKIVRKETGLVFDQSMAEHKCLWD
SNYPECPARFTQVLQRCEELSLMQRCKLIEARLATESEIMTKHSQKQIDILKATDGCVDS
ENLELLSSKYDAIFVHPSTYRLSLLAVGSTMNLVESICKGEIQNGMAIIRPPGHHAMKSE
YCGYCFFNNVALAAEKALSSNLANRILIVDWDVHHGQATQQMFYNDPRVVYFSIHRYEYG
EFWPNLKESDFHYIGEDLGEGYNFNIPLNKTGMTNADYIAIFQQVLLPMAYEFQPDLIIV
SAGYDAALGCPEGEMLVTPACYSHLLSSLLSLAAGKVAVVLEGGYYLKSLAEGAALTLRT
LLGDPCPILQTLDLPSSSIRDTILNVIYAHRPYWKCYQYQDTHSINSITHNKEELANRHV
VMVTYKGSIFKQDKYETRNCYPTQSKEVLESMDKKLNELILFTKLHKTPHKVCIVYDEKM
QKHCNISDNTHPEKPTRISSIYNNHEKHGLLERCHLLQGRSATIEELSLAHSKDYIDSIK
RTSTLKPKELQKQASDYNSVYLHTETWSSACVSAGCLLQMVDAILNGESQSGIAIVRPPG
HHAEEDIACGFCIFNNVAIAAQYAVQFHHVKRVLIVDWDVHHGNGTQSIFEEDPKILYIS
IHRYDNGSFFPNSKRANYTNVGLNAGEGFNVNIPWNKKGMGDAEYVAAFQQIVMPIAYQF
NPELILVSAGFDACVGDPLGGCLVSPELYGHLIHWLSSLANGRIILSLEGGYNINSISHA
MTMCTKALLGDPLPMLDPGLIPCASAINSINNVLKTHKKFWPNLQYGMSLPKEKLLPKLK
KTLNKLDEQGRITEKPKQTESKIALEVIESEKLELNLAIDKNCLNLVTDEEILKLTNEVE
NIKIKNSELRPTRNATDETRRNLGLKKNEIKKFDVSQSIQKCLNKTNQSKDSQQGGSRTH
ENRDNENAISQIHNTPLGSLRQYLSENFQALTAEEMFAVIPLRDCPHLFTVNEVPPGGID
VTLPCMECASTAENWICLQCYTVHCARSVNQHAMQHAEECEHPITLSFSDISVWCYSCEA
YIDNPRLYAARNAAHQSKFNAQLPWTYNENDI
NT seq
3519 nt
NT seq
+upstream
nt +downstream
nt
atgactgaacctatagtgagatcggatttattcactgctgctaaacaattagcagacagt
gaaattgagctaataaaaatgattgaaagttccagcaagtgcgaaagaactgctacaaat
atgtttgaaaatgttaagaaaataaggaagactggaaaatcaaaaaatattcatccatca
gctgcactattggctgccaagcgagaagcagcgcaacgacagctgctgttgggcaagaag
tccaataacagctttatacgagacgtatatcaaaatgcaattgatgcatataaaatagtg
cgaaaggagactggtcttgtatttgatcaaagtatggcagagcataaatgtctctgggat
tcaaattatcccgaatgccctgctagatttacacaagttttgcagaggtgtgaagaactg
agtttgatgcaaagatgtaagctcatcgaagcaagactggctacagagagtgagattatg
acaaaacacagccagaaacaaattgatatcttgaaagcgacagatggctgtgtagattct
gagaatttggaattgctgtcctctaaatatgacgctatctttgttcatccatctacatat
agattatctttactagctgtgggctcaacgatgaatctggtggaaagtatctgtaaaggc
gagattcaaaatggtatggctattattagaccaccaggtcatcatgccatgaaatcagaa
tattgtggttattgcttttttaacaatgtggctcttgcagcagagaaagctttgagtagt
aatttggccaacagaattttaattgtagattgggatgttcatcatggacaagcaacgcaa
caaatgttttacaatgatccacgtgtagtttatttttcaatacatcgatatgaatacggt
gaattctggcctaatctgaaggaatctgattttcattatattggagaggatctcggagag
ggttataactttaacatacccttaaataaaactggcatgactaatgctgattacattgcg
atcttccagcaagttctattgcccatggcttatgaatttcaaccagatcttataatagta
tcagcaggttatgatgcagctctaggttgtccagagggtgagatgttagtaaccccagcg
tgttattctcatttactatcatcgttattaagtctagcagctggaaaagtcgctgtagtt
ttagagggtggttattacttaaaatctttagcagaaggtgcagcactgactttaagaact
ttactgggtgatccatgccctattttacaaacacttgacttgccatcatcaagtatacgt
gacactattctgaatgtaatctatgcacacagaccatattggaaatgttatcagtaccag
gatacgcatagcatcaatagcataacacataataaggaggaacttgctaatagacatgta
gttatggttacatacaaaggcagcatttttaaacaagacaagtatgaaacacggaattgc
tatcctacacaaagcaaagaagttttggaaagcatggataagaaattgaatgaattgata
ctatttacaaaattgcataagacacctcataaagtgtgtatcgtttatgatgaaaaaatg
cagaagcattgcaacatttctgacaatactcatccagagaagccaactcgcatctctagc
atttataataatcatgaaaaacatggcttgctagaacggtgccatttgctacaaggaagg
agtgcaacaatagaagaactatccttggctcattcaaaagactacatcgacagcatcaaa
agaacatcgactttaaaacctaaggaattgcagaagcaagcgtcggattataattccgtt
tatcttcacaccgaaacgtggtcgagcgcctgtgtgtctgccggttgccttttacaaatg
gtagacgcgattttaaatggggaaagtcaatccggaatagccattgtgagaccgccggga
caccatgctgaggaagatattgcatgcggtttttgtatttttaataatgtggctatagct
gcgcaatacgctgtacagtttcatcatgtaaagagagtgttgatagtggattgggatgtg
catcatggtaatggaacacaatccatctttgaagaagatccaaaaattctttatatttct
attcatcgttatgataatggaagtttctttccaaattccaaaagagctaattatacgaac
gttggtttaaatgcaggcgaaggattcaatgtaaacataccatggaacaaaaaaggaatg
ggagatgctgaatacgtagcagctttccagcaaatcgtgatgcccattgcttatcaattt
aatccggaactgatcttggtttctgctggattcgatgcttgcgtgggtgatccccttgga
ggttgcttggtaagtccagaactctacggccatttgatccattggctgtcgtccctggcc
aacggtcgtataatcctcagtcttgaaggaggctacaacatcaattccatttctcatgca
atgaccatgtgcaccaaggctctcttgggcgatcccctgcctatgctggatcctggtttg
atcccctgcgctagcgcaatcaattccatcaacaatgtgttaaagactcataagaaattc
tggcctaatctgcaatatggaatgtccttgccgaaagaaaagctacttcccaagctcaag
aaaactctaaataagcttgacgaacaaggaagaattacagaaaagccgaaacaaacggaa
tcgaaaatcgccttagaagtaattgaaagcgagaaactggagttgaacttggcgatcgat
aagaattgtttgaatctagtgacggatgaagaaattctgaaattgacaaatgaagtggag
aatattaaaattaagaactctgaattacgcccgacgagaaacgcaacggacgagactagg
agaaatcttggattgaaaaaaaacgaaataaaaaagttcgatgtttcgcaaagtatacaa
aaatgcttaaacaaaacgaaccaatcgaaagacagccagcaaggaggttctcgtacacac
gagaatcgtgataacgaaaacgcgatctctcaaatacataatacaccattgggatctctt
aggcaatatctctctgaaaattttcaggctctgacagcagaagaaatgttcgcggtgata
cctctgcgagattgtcctcacctgttcacagtcaacgaggttcctcctggtggaatcgat
gtaactttaccttgcatggagtgtgccagtactgcggagaattggatctgcctgcaatgt
tacaccgtacattgtgctcgtagtgtcaatcagcatgcgatgcaacatgcagaggagtgt
gagcatcccatcacgcttagtttcagcgacatctccgtttggtgctatagttgtgaagcc
tatatcgataaccctcgattatacgcagcaagaaacgcggctcatcaaagcaagttcaat
gcacaacttccttggacttataacgaaaatgacatataa
DBGET
integrated database retrieval system
