Polyergus mexicanus: 138931689
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Entry
138931689 CDS
T10742
Name
(RefSeq) ATP-dependent RNA helicase DDX42
KO
K12835
ATP-dependent RNA helicase DDX42 [EC:
5.6.2.7
]
Organism
pmec Polyergus mexicanus
Pathway
pmec03040
Spliceosome
Brite
Enzymes [BR:
pmec01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
138931689
Spliceosome [BR:
pmec03041
]
Complex A
U2 snRNP components
U2 snRNP specific factors
138931689
Complex B
138931689
Complex C
U2 SnRNP specific factors
138931689
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Other DBs
NCBI-GeneID:
138931689
NCBI-ProteinID:
XP_070148807
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Position
Unknown
AA seq
770 aa
AA seq
DB search
MSYHRGSGNKPKGFGFAGFQMSGTKRSGTNIPPPPPNSTLSKQGYHTMNAITENALSACW
GMPKKRSKTEEEYFEDDDEPPTSSLEYIPAPGSPTYDLMKKSATKDESDGEEDPLDAFMA
GIDAEVKRNSCVAQGGDNRKEDKSKGFRPDIDGEDDEESYYRYMEENPTAGLQQEESDQE
IEYDEDGNPIAPPKKKEIDPLPSIDHSEIEYEPFDKNFYNVHEEIASLSKQQVDDLKNTL
GIKVSGPSPPNPVTSFAHFGFDDALIKTIRKNEYTQPTPIQAQAVPAALNGRDIIGIAKT
GSGKTAAFIWPMLVHIMDQRELKTGDGPIGLILAPTRELSQQIYQEAKKFGKVYNIQVCC
CYGGGSKWEQSKALESGAEIVVATPGRMIDLVKMKATNLTRVTFLVLDEADRMFDMGFEP
QVRSICNHVRPDRQTLLFSATFKKKVEKLARDVLTDPIRIVQGDVGEANTDVTQHVVMFH
NNPSGKWNWLLQNLVEFLSAGSLLIFVTKKLNAEELANNLKLKEFDVLLLHGDMDQIERN
KVITAFKKKDVSTLVATDVAARGLDIPHIKTVVNYDVARDIDTHTHRIGRTGRAGEKGTA
YTLVTEKDKEFAGHLVRNLEGANQEVSKSLMDLALQSAWFRKSRFKSGKGKSLNIGGAGL
GFRGRPESSSSGGSSSTQASKDISEVVKKLERHGPGSDRLSAMKAAFRSQYNSQFRASSD
HTWEQTITPPSVIMPPPPTVPPPKPAAQDNTQASNSTEPERKRVRKSRWE
NT seq
2313 nt
NT seq
+upstream
nt +downstream
nt
atgagttatcaccgaggaagtggtaacaagccaaaaggttttggttttgctggcttccaa
atgtctgggacaaaaagaagtggtactaatatacctccacctccaccaaactcgaccttg
agtaaacaaggctatcacacaatgaatgctattacagaaaatgctttgtccgcttgttgg
ggtatgcctaaaaaacgcagcaaaacagaagaggaatatttcgaagatgatgatgaaccc
ccgacttcatcattagaatatatacctgcacctggttctcctacatatgatttaatgaaa
aaatctgcaacaaaagatgaaagcgatggtgaagaagatcctttagatgctttcatggct
ggtattgatgcagaagtgaagcgaaacagttgtgtagctcaaggtggtgataatcgtaag
gaagacaaatcaaaaggatttcggccagacattgatggggaagatgatgaggagagttac
tataggtatatggaagagaacccaactgctggtttgcaacaagaagaatccgatcaagaa
attgaatacgacgaagacggtaatcccattgcgccaccaaagaaaaaagagattgatccg
ctaccttcgatcgatcacagtgaaatagaatatgaaccattcgacaaaaatttttataat
gtgcatgaagaaattgcaagcttaagtaaacaacaggttgatgacttgaaaaatactttg
ggtataaaggtatccggaccatctccgcctaatccggtcacaagtttcgcccatttcggc
tttgatgacgcgctgataaaaactatccgtaaaaatgaatacacacagcctacacctatt
caagctcaagcagttcctgctgctttgaatggacgagatataataggtatagcaaaaact
ggtagcggtaaaacagcggcatttatctggccgatgttagtgcatattatggatcagcgc
gaattgaaaactggagatggtcctatcggtcttatcttggcaccgacgagagaattatca
caacaaatttatcaagaagcgaagaaatttggaaaagtttataatatccaagtgtgttgt
tgctatgggggcggtagcaaatgggaacagagcaaagctttggaaagcggcgcggagatt
gtggtcgctacccctggtagaatgattgatcttgttaaaatgaaagcaacgaatttaact
agagttacatttttggttctggatgaagccgatagaatgttcgatatgggatttgaacct
caagtacgctctatctgtaatcacgtgaggcccgacagacaaacattgctgttcagtgcg
acattcaaaaagaaagtagaaaaacttgctagagatgttttaacagatcctattagaata
gtgcaaggtgatgtcggtgaggccaacactgacgtgacgcaacatgttgtcatgtttcat
aacaatcctagtggtaaatggaattggctgttacagaacttagttgaatttctaagcgct
ggcagtcttttaatctttgtcactaagaagctgaacgcggaagaacttgccaataatctc
aaattgaaagaatttgatgtattgcttttgcatggtgatatggatcaaatcgagagaaat
aaagtgattacagcttttaaaaagaaggatgtcagtactttggttgctactgatgtagcc
gcgcgaggtttggatattccacatatcaagactgtcgtaaattacgatgtagcgcgagat
atcgatactcacacgcatagaataggaagaactggacgagccggtgagaaaggtacagcg
tatactcttgtaactgaaaaggataaggaatttgccggacatttagtaagaaatttggag
ggagcgaatcaagaagtgtcaaagagcttgatggatttggctttacaaagtgcatggttt
aggaaatcaagattcaaaagtgggaaagggaagagtttaaatatcggtggagctggactt
ggcttcagaggtagaccagaatcgtcgagttcgggtggatcatcgtcaacgcaagcgtcc
aaggatatcagtgaggtagttaaaaaattagaaagacacggacctggtagcgatcgactc
tccgctatgaaagctgctttccgaagtcaatataattctcagttccgagcatcgtcagat
catacttgggaacagacaatcactccaccttctgtgataatgccgccaccgccgaccgta
ccaccaccgaagccagcagctcaggataacactcaagcctccaattccacggaaccggag
cgtaaaagagtgcgaaaaagtcgatgggagtga
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