Polyergus mexicanus: 138931703
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Entry
138931703 CDS
T10742
Symbol
Pnpase
Name
(RefSeq) polyribonucleotide nucleotidyltransferase 1, mitochondrial
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
pmec Polyergus mexicanus
Pathway
pmec03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pmec00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
138931703 (Pnpase)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pmec03019
]
138931703 (Pnpase)
03016 Transfer RNA biogenesis [BR:
pmec03016
]
138931703 (Pnpase)
Enzymes [BR:
pmec01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
138931703 (Pnpase)
Messenger RNA biogenesis [BR:
pmec03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
138931703 (Pnpase)
Transfer RNA biogenesis [BR:
pmec03016
]
Prokaryotic type
tRNA degradation factors
138931703 (Pnpase)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
PNPase
KH_1
RRM_DEAH11
DUF3855
Motif
Other DBs
NCBI-GeneID:
138931703
NCBI-ProteinID:
XP_070148826
LinkDB
All DBs
Position
Unknown
AA seq
775 aa
AA seq
DB search
MIVSTNVSRLSRYHKPVLLAGKNSYKNGNTSYVKFSNARRKSHTNAGTEVITLSDGKQLS
LSTGKYARFADGSAIASLGDTSVMVTAVCKHQSSSSSFLPLVVDYRQKAAAAGRIPTNFL
RRELGPTENEILTSRVIDRSIRPLFPEGFHFDTQIMCNMLAVDGMNDPDVIAINGASTAL
SVSDIPWNGPVGAIRIGMINNEFIINPTRRQIQDSILNMIITATKQNLIIMLEGSANEIL
EPDLRKAIKLGVKECQSIVNAIANLQKIYGKTKRKIETNEQSQDNDLISSMKELSEIKLR
DIFSNHTHDKISRDNAINDLRNNVIETLKNDNADLDIKLAEKIFGKITKDLFRTLILETD
VRCDGRPMDGIRDISCQIDLFNPLHGSAVFQRGQTQVMCTVSLDSLESALKMDPMSMLIS
GVKEKNFFLHYEFPPYATNETGHVGRIGRREIGHGALAEKALRPILPKDYPFTIRLTSEV
LESNGSSSMATVCGGSLALLDAGIPISSSAAGVAIGLVTKYNETNTDIDNYKILTDILGI
EDYFGDMDFKVAGTKRGFTALQADVKIPGVPLKIIMECIQQATTAKWEIIKIMNEVIRTP
QQKRKDKMPMVDSLEVPIHQRGKFLGIGGMNIKKIFLETGVHIFPQDENTYSIFAPNEDA
MTEAKEMIENILQKDREPTLEFGAIYTARIVEIREIGVMVTLYSNMVPALLPNSQLDQRK
IHHPSALGLEVGQEISVKYFGRDPVSGQIRISRKVLQEPISITRTLHRDNDRERM
NT seq
2328 nt
NT seq
+upstream
nt +downstream
nt
atgatagtgtcaacaaatgtgtctaggttatcgagatatcacaaaccagtgcttttggcc
ggcaaaaactcgtataaaaatggaaatacgtcctacgttaagtttagtaacgcgagaaga
aaaagtcacacgaacgccggcacggaagtcatcacgctgtctgatggcaaacaactcagc
ttgtctacaggcaagtatgcacgtttcgctgatggtagcgcaatcgcgtctttgggcgat
acttccgtcatggtcacagcggtttgcaagcatcaatcgtctagctcctcgttccttcca
ctcgtcgtagattatagacagaaggcagcagcagccggtcgcataccgacaaatttctta
cggagagaactcgggccgactgaaaacgagattctcacgagcagagttattgatcggtca
atacggccgttatttccagagggattccacttcgacacacagataatgtgcaatatgtta
gccgtcgatggtatgaacgatcctgacgtgattgccattaacggcgcctccacggctctt
agtgtctcagatataccgtggaatggtcctgtaggcgcgatcaggatcgggatgatcaat
aatgaatttataattaatcctacaagacgtcaaattcaagatagtatattaaatatgatt
atcactgcgactaaacaaaatttaatcattatgttagagggttcggccaatgaaatattg
gagccggatctgcggaaggcgataaaactcggcgtaaaagaatgccagagtattgtaaac
gcgatagcaaatttgcagaagatatatggtaaaacgaaaagaaagatcgaaactaacgaa
caatcacaagacaatgatttgatcagttctatgaaggaactttcggagataaaattgcga
gatatattttcaaatcacacccatgataagatctctagggacaatgcgattaatgatctt
agaaataatgttattgaaacattgaagaatgataatgcagatttggatattaaattggcg
gaaaaaatatttggaaaaattaccaaagatcttttcagaacactaatattagagacagac
gtcagatgcgacggtcgtccaatggatggtatacgcgacatatcgtgtcagatagatctt
tttaaccctcttcatggctcggctgtgtttcaacggggacagacccaggtcatgtgtact
gtgtctctggactctctggaaagcgcgcttaagatggaccccatgtcaatgttaattagt
ggtgtgaaggaaaaaaatttctttctccattacgaatttccgccctatgcaactaatgaa
acaggacatgtaggtcggataggccgccgggagataggacatggcgccttagcggagaaa
gccttgcggccgattcttccaaaggattatccgtttaccataagactgactagcgaggtt
ttggaatcaaacggttcttcttcaatggctaccgtttgtggcggaagtttagcactgctc
gatgcaggcatacctatatcttcatcagcagcaggtgtggccatcggtctggtgactaaa
tataatgaaactaacacggatattgataattataagatattgaccgacatattgggaatc
gaagattatttcggagatatggatttcaaagtggcaggcaccaagcggggattcaccgca
ttgcaggccgatgtaaagataccaggagttccactaaaaatcataatggagtgcatacag
caagcgacaactgctaaatgggagatcattaaaatcatgaacgaagtgatacgaacaccg
caacaaaagagaaaggacaagatgccgatggttgatagtttagaggttcctattcatcaa
agaggaaagtttctcggaatcggcgggatgaatataaagaagatattcttggaaaccgga
gtacacatatttccacaggacgagaacacatattctatatttgcgccaaacgaagatgcc
atgaccgaagctaaggaaatgatagaaaatattttgcagaaggatcgcgaaccgacctta
gagtttggcgccatttataccgcaaggatagtagaaatacgagagattggagttatggtg
acactatattctaacatggtgccagcattattacctaattctcaattagatcaacgcaag
attcatcaccctagtgctctgggactcgaagttgggcaggagatatctgttaaatacttt
ggacgagacccagtgtccggacagattaggatatcgcggaaagtactgcaagaaccgatc
tcgatcacgagaactctgcatcgggataacgatcgggaaaggatgtga
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