KEGG   Polyergus mexicanus: 138931818
Entry
138931818         CDS       T10742                                 
Name
(RefSeq) replication factor C subunit 4
  KO
K10755  replication factor C subunit 2/4
Organism
pmec  Polyergus mexicanus
Pathway
pmec03030  DNA replication
pmec03410  Base excision repair
pmec03420  Nucleotide excision repair
pmec03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:pmec00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    138931818
   03410 Base excision repair
    138931818
   03420 Nucleotide excision repair
    138931818
   03430 Mismatch repair
    138931818
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:pmec03032]
    138931818
   03036 Chromosome and associated proteins [BR:pmec03036]
    138931818
   03400 DNA repair and recombination proteins [BR:pmec03400]
    138931818
DNA replication proteins [BR:pmec03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   RFC (replication factor C)
    138931818
  DNA Replication Termination Factors
   ELG1-RFC complex
    138931818
Chromosome and associated proteins [BR:pmec03036]
 Eukaryotic type
  Sister chromatid cohesion proteins
   CTF18-RFC complex
    138931818
DNA repair and recombination proteins [BR:pmec03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    RFC (replication factor C)
     138931818
  Check point factors
   HRAD17(Rad24)-RFC complex
    138931818
SSDB
Motif
Pfam: Rep_fac_C AAA RCF1-5-like_lid DNA_pol3_delta2 Rad17 AAA_16 AAA_22 AAA_14 bpMoxR AAA_11 RuvB_N DUF815 AAA_assoc_2 ResIII AAA_7 NB-ARC Mg_chelatase AAA_30 AAA_2 AAA_19 AAA_24 AAA_5 DNAX_ATPase_lid nSTAND3 RNA_helicase TniB Bac_DnaA AAA_3 Gp44_lid SLFN-g3_helicase AAA_29 AAA_28
Other DBs
NCBI-GeneID: 138931818
NCBI-ProteinID: XP_070149071
LinkDB
Position
Unknown
AA seq 356 aa
MHAFLKTGKLGAPTDVKKPSTSRAKDDKKDLTPWVEKYRPRNVDDIVEQTEVVNVIRQAM
KHGDFPNMLFYGPPGTGKTSIIHAAARQMFGSMYKDRILELNASDDRGIQIVREKIKSFA
LRRANPIGPDGKRCPPFKIIILDEADSMTGAAQTALRRIMEKEAHSTRFCLVCNYLSRII
KPIASRCTKFRFKPLSDEKSITRLEYICNEENLKADRSVLEKIVEASGGDLRQAVMCLQS
ITRLKGKDYEITVDDALDVIGLIPDDKIDTLWETCKKGSYNNVEKLLEQLLLEGYPGSQV
IEQLNEKVVFSDELTDKQKVMIGDMLGECDYKLTEGSDEYLQLLSIFSTILAAWKL
NT seq 1071 nt   +upstreamnt  +downstreamnt
atgcacgctttcctgaaaactggtaaactcggcgctccaacagatgtgaagaaaccgtcg
acttctcgcgctaaggatgacaagaaagacttgacaccatgggtggaaaaataccggccg
aggaatgtcgacgatatcgtggagcagacggaggtggtaaatgtgataaggcaagccatg
aagcacggagactttcctaacatgctgttttatggaccacctggtacagggaaaactagc
attatccatgcagccgcgaggcagatgtttgggagcatgtacaaagataggatactggaa
ctgaatgcttctgatgatcgaggtatccagattgtgagggagaagatcaagtcctttgca
ctgcgcagggctaatcccatcggaccagacgggaaaagatgtccaccatttaaaatcatc
atattggacgaagcggacagtatgaccggtgcagcgcaaacagcacttcgtcgaattatg
gaaaaagaggctcatagcacgcgcttttgcctagtatgcaattatctgtctcgaattatc
aagccgatagcgtcgcgctgcaccaaattccggttcaagccattgagcgatgagaagagt
attaccagacttgaatatatatgcaatgaggagaatctgaaggccgatagaagcgtttta
gagaaaattgttgaagcatcgggtggcgatttgagacaggctgtcatgtgtctgcagtcg
atcacacgattgaagggcaaggactacgagatcaccgtggacgatgctctcgatgtgatc
ggactaattcccgatgataaaattgatacattgtgggagacctgtaaaaaagggagttat
aataatgtcgaaaagttgctcgaacaattgctgctggaaggatatccgggttcacaagta
attgaacaattaaacgagaaagtagttttctctgatgaacttaccgacaagcagaaagtg
atgattggcgatatgctcggggaatgtgattataaattaacagaaggaagtgatgaatat
ctgcagcttttaagtatattttctaccatcttagcagcgtggaagttataa

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