| Entry |
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| Symbol |
U2af50
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| Name |
(RefSeq) splicing factor U2AF 50 kDa subunit isoform X1
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| KO |
| K12837 | splicing factor U2AF 65 kDa subunit |
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| Organism |
pmec Polyergus mexicanus
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| Pathway |
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| Brite |
KEGG Orthology (KO) [BR:pmec00001]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
138931920 (U2af50)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:pmec03041]
138931920 (U2af50)
Spliceosome [BR:pmec03041]
Complex A
U2 snRNP components
U2 related factors
138931920 (U2af50)
Complex B
138931920 (U2af50)
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| SSDB |
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| Motif |
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| Other DBs |
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| LinkDB |
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| Position |
Unknown
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| AA seq |
432 aa
MGEDFNGDRDRQDRDKDRDRDRERDRRHRSRSRDRRKRSRSRSKDRRDRKRSNSPKKSRS
SRRRKPSLYWDVPPPGFEHITPLQYKAMQAAGQIPANIVADTPQAAVPVVGSTITRQARR
LYVGNIPFGVTEEEMMEFFNQQMHLSGLAQAAGNPVLACQINLDKNFAFLEFRSIDETTQ
AMAFDGINFKGQSLKIRRPHDYQPMPGMTDNPSMNVPGTVPDSPHKIFIGGLPNYLNEEQ
VKELLMSFGQLRAFNLVKDSATGLSKGYAFCEYVDVSMTDQAIAGLNGMQLGDKKLIVQR
ASVGAKNPMIGAQAPVQIQVPGLSMVGTSGPATEVLCLLNMVTPEELMEEEEYEDILEDI
KEECNKYGVVRSVEIPRPIEGVDVPGCGKVFVEFNSVIDCQKAQQTLTGRKFNNRVVVTS
YFDPDKYHRREF |
|---|
| NT seq |
1299 nt +upstreamnt +downstreamnt
atgggcgaggattttaacggagatcgtgacagacaggatcgggataaagatagagatcga
gatagagaacgtgataggaggcatcgatcacgaagcagagatcgtagaaagcgatcgcgt
tctcgctccaaggatcgtagagatagaaagaggagtaactcacccaagaaaagtcgtagc
tctaggagaagaaaaccttctctttattgggatgtgccaccacctggttttgaacatatt
actcctttgcagtacaaggctatgcaagctgctggacaaattcctgcaaatattgtagca
gacacgccacaggcagctgtacctgtagttggtagcactataactcgtcaagcgagaaga
ctttatgtagggaacattccatttggtgtcactgaggaagaaatgatggaattcttcaat
caacagatgcatctgtctggactcgcacaagccgccggaaatccagtattggcgtgtcaa
attaatttagacaaaaatttcgcatttttggagttccgatcaatagatgaaactactcaa
gccatggcatttgatggtataaattttaaaggacagagtttgaaaataagaaggccacat
gattaccaaccaatgccagggatgactgataatccaagcatgaacgtgccaggtacggtt
cccgattcgccgcacaagatcttcattggtggcttaccaaattatttgaatgaggaacag
gtgaaagagttattgatgagctttggacaactgagggcattcaatttagtaaaggattcc
gctactggtctctccaagggttatgccttctgcgaatatgtagacgtctcgatgaccgat
caggcgattgctggattgaacgggatgcaattgggtgataagaaattaattgtacaacgc
gccagcgtaggtgctaagaatcccatgataggcgcacaagctccagtacaaattcaagtg
cctggtttgtcgatggtcggcacgagtggacctgcgaccgaagtgctttgtttgctcaat
atggtcacaccggaagaattaatggaagaagaagaatatgaagacattctcgaggatatt
aaagaagagtgtaacaaatacggcgttgtgcgatctgtggaaattccaagacccatcgaa
ggtgtcgatgtacccggatgtggaaaggtatttgttgaattcaatagcgtgattgactgt
caaaaggcgcagcaaactctcacaggacgaaagtttaataatcgcgttgtagtcacatcg
tacttcgatcccgacaaatatcatcgtagagaattctaa |
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