Polyergus mexicanus: 138932197
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Entry
138932197 CDS
T10742
Symbol
Cpsf5
Name
(RefSeq) cleavage and polyadenylation specificity factor subunit 5
KO
K14397
cleavage and polyadenylation specificity factor subunit 5
Organism
pmec Polyergus mexicanus
Pathway
pmec03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
pmec00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
138932197 (Cpsf5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pmec03019
]
138932197 (Cpsf5)
Messenger RNA biogenesis [BR:
pmec03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Pre-mRNA cleavage factor Im (CFIm)
138932197 (Cpsf5)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
NUDIX_2
Motif
Other DBs
NCBI-GeneID:
138932197
NCBI-ProteinID:
XP_070149882
LinkDB
All DBs
Position
Unknown
AA seq
228 aa
AA seq
DB search
MAMATNQVKGSGWPRRASNSSFEGKVVQNQSVTINRTVNLYPLTNYTFGTKEPLFEKDPS
VPARFQRMRDEFDKIGMRRSVEGVLLVHEHGLPHVLLLQLGTTFFKLPGGELNAGEDEVE
GLKRLLTETFGRQDGVKQEWVIEDTIGNWWRPNFEPPQYPYVPPHITKPKEHKRLFLVQL
QEKALFAVPKNYKLVAAPLFELYDNSQGYGPIISSLPQSLCRFNFIYM
NT seq
687 nt
NT seq
+upstream
nt +downstream
nt
atggcgatggcgacgaatcaagtcaagggcagcggatggccacggcgagcgagcaacagc
tcgttcgaggggaaagttgtgcagaatcaatcggtcaccataaacaggactgtaaattta
tatcctttgacaaactatacatttggaacaaaagagccactcttcgagaaagatccgtca
gtaccagcgagatttcagcgtatgagagatgaattcgacaaaattggcatgcggagaagc
gtagaaggcgtcttactggtacatgagcatggattgccacacgttctccttctgcaactt
ggcacaacattcttcaaattgcctggcggagaactcaatgcaggagaagatgaggtagag
ggcctaaaacggctccttacagagacttttggacggcaggatggggtgaagcaggaatgg
gttatagaagatacaattggaaactggtggcgtccaaattttgagccacctcagtaccca
tatgtaccgccacacatcacaaaaccaaaggagcataaaagattatttctggtacaactg
caagaaaaagctctctttgctgtaccaaagaattataaattagtcgccgcaccattgttt
gaactttatgacaattcacaaggttacggtcccataatttcatctttgccacaatcactg
tgcagatttaatttcatctatatgtga
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