Polyergus mexicanus: 138932750
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Entry
138932750 CDS
T10742
Name
(RefSeq) RNA exonuclease 1 homolog
KO
K14570
RNA exonuclease [EC:3.1.-.-]
Organism
pmec Polyergus mexicanus
Pathway
pmec03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
pmec00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
138932750
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pmec03009
]
138932750
Ribosome biogenesis [BR:
pmec03009
]
Eukaryotic type
Pre-60S particles
RNases
138932750
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
EloA-BP1
Motif
Other DBs
NCBI-GeneID:
138932750
NCBI-ProteinID:
XP_070150981
LinkDB
All DBs
Position
Unknown
AA seq
1198 aa
AA seq
DB search
MLPSTGYFKTINCPFYDTGSCDRPYCHFKHTRREDAGSGTAGMAGVVETQALGQAQEDKS
VDVMASNPDMLQHLVTEAVKKVLADQEVTDTEKVSQNIVSQVVEGLKPTLGSGSATPMRN
ASDIVGKHITIPTPITKPIACVYNPTPIAELKKRHIPVVSYMPTRESRVAVKRKFSPERV
KPWLNIIQESSSSQSSEVTYKPTAIVNSIEQDIVQSYIPTVKSDSSSSNSYDDSNSNDYQ
SKFKEVYYPKSKKRREEYVPKNVKAPLKTVQQLNHATLDQFEPEFDMIDEILTADHTTSN
ALEQAKTSASEDSQDYFLDIEPKFSDDESIEDISNNEHKSIKKAEQIEDANEKEKENLQH
ARTDTVDKQTSNKDKKMHNNHYDAKTGDTKSNIDRSKHKASDTSKLSQRREESTKQSTDK
EKERHKSHSKSNKRNRKDHHNSERKDKERSRHESDSRDRHRPSSSKDKNRKKNNRDNKDP
SCQNRDHSDSRKYRHTSPKTDRNNHHKSSRHDKHKSKSNLSSSVSNKHTSSKSDRKHQSE
SSRRLNDSSRKSSKYKENSSERNSFGSPADSIHSFMDEEILELSDSDHDVQEECLRIFQE
YQASDHPKLVSIKKSLKEETEDMEEVGKKRVAHPSAATSVTRQSGPSQPPKKLITPQQKM
YERWRLMKKVATGKAAEKAIAEMKTQVTSMSAVQSSSNLQKEHIESASSTNNNDLQSNVN
SRVRIAHVPYAQSLAMEKKKVTVTAEKCRDHKEVNNKTIAQTTKGSVRVAHIPQIVPQLV
RPEPLQVATQKFPLNVRQYYINIMHDICVQIYTNSDDAAQRAIKEELTCHEKCKALAVYK
SSCMLAVHRLRKEVDQNKSNEKSVGLNYGMISHEAMLAGKSRGSWSIVKSKKSVVDFKGP
AFYNMLKKWVMSEEQLRDNGFPRRHPDDTKGRAKVYVINARNQSVLSKVPNQRICSRCGQ
AYMVNKQGFAVPQQNCIYHWGRKFTIKGEGKYSCCQQYGSATGCCDAKTHVWDYTDYENL
RGYVRTLSKDVSMDEQGVYALDCEMCYTTYGLELTRVTVIDEDCNVIYETLVKPQNPIID
YNTRFSGITEEDMKDVTTTILDVQATLLTMFSDKTVLVGHSLESDFKALRLLHDTVVDTS
VIFPHKNGYPQKRALKNLCSEYLRKIIQNDISGHDSKEDAVACMELIRWKVKEAAKLQ
NT seq
3597 nt
NT seq
+upstream
nt +downstream
nt
atgttgccttccaccggttatttcaaaacgataaattgcccgttttatgacaccggatcg
tgcgatcgaccctattgtcatttcaaacatactaggcgagaagatgcaggcagtggcaca
gcaggaatggctggagtggtggagacccaggcactggggcaagcgcaggaggacaaatct
gtcgatgttatggcctcaaatcctgatatgctacaacatttagtgacagaggctgtaaaa
aaagtacttgcagatcaggaagttacagatacggagaaagtttcgcaaaacattgtctct
caagtagtggaaggactcaagccaaccttgggctctggttctgctacccctatgcgcaat
gcatcagatatagtaggaaagcatattacaattcccacgcccattacaaagccaattgca
tgtgtttacaatccaacaccgatagcggaattgaagaaacggcacatacctgtagtttcg
tatatgccaaccagggagagtagagtggctgtgaaacgtaaattttcgccggaaagggtt
aaaccatggctaaacatcatacaggaatccagcagctctcaatcgtctgaagttacatat
aaacctactgcaatagtcaattcaattgaacaagatattgtacagagttacataccgaca
gtcaaatcagattcatcatcatcaaactcgtacgatgacagtaactcgaatgattatcag
tctaaatttaaagaagtatattatccgaaatctaaaaaaagacgggaggagtatgttcct
aaaaatgtcaaggcgccattaaaaacagttcagcaattaaaccatgctactttggatcaa
tttgaaccagaatttgatatgatagatgaaattcttactgccgatcacactacttctaac
gcgttagaacaagccaaaacatcggctagcgaggattctcaagattactttttggatatt
gaacctaaattttctgatgatgaatctatagaagacatatctaacaatgaacataagagc
attaaaaaggctgagcaaatagaggatgcgaatgaaaaggagaaggaaaacttgcaacat
gcaagaactgatactgtagataaacaaacaagcaataaagataaaaaaatgcataataat
cactatgatgctaaaacgggtgatacaaaaagtaatatagatagatctaaacataaagca
agtgacacaagtaaattatcacagagacgagaagaaagtacaaaacagagtactgacaag
gagaaagaaagacataagagccatagtaaaagcaacaaaaggaatagaaaagatcatcat
aattctgagagaaaagacaaagaaagatctcggcatgaatcagattccagagatagacat
cgtccttcttctagtaaagataaaaacaggaaaaaaaacaatcgtgataataaagaccct
tcgtgtcaaaatagagatcattcggattcgcggaaatataggcatacttctccaaagaca
gatcgaaacaatcatcataaatctagccggcatgataaacataaatcaaaatcaaattta
tccagttctgtatcgaataaacatacatctagcaaaagcgacaggaagcatcaatcggaa
tcaagtcggagattaaatgattcttccagaaaatctagcaaatataaagaaaatagtagt
gaaaggaattcattcggtagtcctgcagacagtattcattcttttatggacgaagagatt
ttggaattatcagattctgatcatgatgtacaagaagaatgcctaagaatatttcaggaa
tatcaagcttctgatcatccaaaattagtatcaatcaaaaaatctttgaaagaagaaacc
gaagatatggaagaagttggtaagaaaagagttgcgcatccttcagcggctacaagcgtc
actagacagtctggtcctagtcagccaccaaaaaagcttataacaccacaacagaaaatg
tacgagcgatggcgtttgatgaagaaagtagcaaccggaaaggccgcggaaaaggcgata
gctgaaatgaagactcaagttacatctatgtcagcagttcagtcctcaagtaatttacaa
aaagaacatatcgagtccgcgtcgtcaacaaacaataacgatctgcaatcgaatgtgaat
agtcgtgttagaattgctcatgttccgtatgcacaatctcttgcaatggaaaagaaaaag
gtcacagtaacagcagaaaagtgcagggaccacaaagaagtaaataacaaaacaatagcg
caaactacgaaaggcagtgtacgcgtcgctcacattccgcaaatagtacctcaactggta
cgtccagaaccgctccaagtcgctacgcagaaatttcccttaaatgttcgtcagtattat
attaatataatgcacgatatatgcgtgcaaatttatacgaatagtgatgatgcagcgcaa
cgtgccattaaagaggaactcacatgtcacgaaaaatgtaaggcgcttgctgtatacaaa
agttcgtgtatgctggcagttcataggctgaggaaagaagttgatcagaataaatcgaat
gaaaaatccgttggattgaactatggtatgatatctcacgaagccatgcttgctggcaaa
tcgagaggctcttggagcatagtcaagagtaaaaagagtgtggtagattttaaaggacct
gcattctacaatatgctcaagaaatgggtcatgtctgaggagcagctcagagataatggg
tttccacgaagacatccggatgatacaaagggacgagcaaaggtatatgtaataaatgca
cggaaccaaagtgttttatcaaaagtgcctaatcaaagaatatgcagtcgatgtggccaa
gcgtatatggtaaataaacagggctttgctgtaccacaacaaaactgtatatatcactgg
ggaagaaaatttacaattaaaggcgagggcaagtacagttgttgccaacaatacggatca
gctactggttgctgtgatgcaaaaacacatgtgtgggattacacagattatgaaaatctt
cgcggttatgttagaactttatcaaaagacgtttctatggacgaacaaggtgtctatgca
ctcgattgtgaaatgtgttatactacatatggtttagaattgactagagtgacagtgatt
gatgaagattgtaacgtaatatatgaaacattggtcaaaccacaaaatccgataattgat
tataacacaaggttctcagggattacagaagaagatatgaaggacgtgacgacgactatt
ttagatgtacaagctacacttctcacaatgttttcggacaaaacagtcctggtgggtcat
agccttgaaagcgattttaaagctttgagactgcttcacgataccgttgtggataccagc
gttatatttccacataagaatggatatccgcaaaaacgggcattgaaaaatctctgttct
gaatatctcagaaaaatcatacaaaatgacatcagtggtcatgacagtaaagaagatgcc
gtcgcttgtatggagttaattcgctggaaagtgaaggaagcagcgaaattacagtaa
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