Entry |
|
Name |
(RefSeq) RNA exonuclease 1 homolog
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KO |
K14570 | RNA exonuclease [EC:3.1.-.-] |
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Organism |
pmec Polyergus mexicanus
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Pathway |
|
Brite |
KEGG Orthology (KO) [BR:pmec00001]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
138932750
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:pmec03009]
138932750
Ribosome biogenesis [BR:pmec03009]
Eukaryotic type
Pre-60S particles
RNases
138932750
|
SSDB |
|
Motif |
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Other DBs |
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LinkDB |
|
Position |
Unknown
|
AA seq |
1198 aa
MLPSTGYFKTINCPFYDTGSCDRPYCHFKHTRREDAGSGTAGMAGVVETQALGQAQEDKS
VDVMASNPDMLQHLVTEAVKKVLADQEVTDTEKVSQNIVSQVVEGLKPTLGSGSATPMRN
ASDIVGKHITIPTPITKPIACVYNPTPIAELKKRHIPVVSYMPTRESRVAVKRKFSPERV
KPWLNIIQESSSSQSSEVTYKPTAIVNSIEQDIVQSYIPTVKSDSSSSNSYDDSNSNDYQ
SKFKEVYYPKSKKRREEYVPKNVKAPLKTVQQLNHATLDQFEPEFDMIDEILTADHTTSN
ALEQAKTSASEDSQDYFLDIEPKFSDDESIEDISNNEHKSIKKAEQIEDANEKEKENLQH
ARTDTVDKQTSNKDKKMHNNHYDAKTGDTKSNIDRSKHKASDTSKLSQRREESTKQSTDK
EKERHKSHSKSNKRNRKDHHNSERKDKERSRHESDSRDRHRPSSSKDKNRKKNNRDNKDP
SCQNRDHSDSRKYRHTSPKTDRNNHHKSSRHDKHKSKSNLSSSVSNKHTSSKSDRKHQSE
SSRRLNDSSRKSSKYKENSSERNSFGSPADSIHSFMDEEILELSDSDHDVQEECLRIFQE
YQASDHPKLVSIKKSLKEETEDMEEVGKKRVAHPSAATSVTRQSGPSQPPKKLITPQQKM
YERWRLMKKVATGKAAEKAIAEMKTQVTSMSAVQSSSNLQKEHIESASSTNNNDLQSNVN
SRVRIAHVPYAQSLAMEKKKVTVTAEKCRDHKEVNNKTIAQTTKGSVRVAHIPQIVPQLV
RPEPLQVATQKFPLNVRQYYINIMHDICVQIYTNSDDAAQRAIKEELTCHEKCKALAVYK
SSCMLAVHRLRKEVDQNKSNEKSVGLNYGMISHEAMLAGKSRGSWSIVKSKKSVVDFKGP
AFYNMLKKWVMSEEQLRDNGFPRRHPDDTKGRAKVYVINARNQSVLSKVPNQRICSRCGQ
AYMVNKQGFAVPQQNCIYHWGRKFTIKGEGKYSCCQQYGSATGCCDAKTHVWDYTDYENL
RGYVRTLSKDVSMDEQGVYALDCEMCYTTYGLELTRVTVIDEDCNVIYETLVKPQNPIID
YNTRFSGITEEDMKDVTTTILDVQATLLTMFSDKTVLVGHSLESDFKALRLLHDTVVDTS
VIFPHKNGYPQKRALKNLCSEYLRKIIQNDISGHDSKEDAVACMELIRWKVKEAAKLQ |
NT seq |
3597 nt +upstreamnt +downstreamnt
atgttgccttccaccggttatttcaaaacgataaattgcccgttttatgacaccggatcg
tgcgatcgaccctattgtcatttcaaacatactaggcgagaagatgcaggcagtggcaca
gcaggaatggctggagtggtggagacccaggcactggggcaagcgcaggaggacaaatct
gtcgatgttatggcctcaaatcctgatatgctacaacatttagtgacagaggctgtaaaa
aaagtacttgcagatcaggaagttacagatacggagaaagtttcgcaaaacattgtctct
caagtagtggaaggactcaagccaaccttgggctctggttctgctacccctatgcgcaat
gcatcagatatagtaggaaagcatattacaattcccacgcccattacaaagccaattgca
tgtgtttacaatccaacaccgatagcggaattgaagaaacggcacatacctgtagtttcg
tatatgccaaccagggagagtagagtggctgtgaaacgtaaattttcgccggaaagggtt
aaaccatggctaaacatcatacaggaatccagcagctctcaatcgtctgaagttacatat
aaacctactgcaatagtcaattcaattgaacaagatattgtacagagttacataccgaca
gtcaaatcagattcatcatcatcaaactcgtacgatgacagtaactcgaatgattatcag
tctaaatttaaagaagtatattatccgaaatctaaaaaaagacgggaggagtatgttcct
aaaaatgtcaaggcgccattaaaaacagttcagcaattaaaccatgctactttggatcaa
tttgaaccagaatttgatatgatagatgaaattcttactgccgatcacactacttctaac
gcgttagaacaagccaaaacatcggctagcgaggattctcaagattactttttggatatt
gaacctaaattttctgatgatgaatctatagaagacatatctaacaatgaacataagagc
attaaaaaggctgagcaaatagaggatgcgaatgaaaaggagaaggaaaacttgcaacat
gcaagaactgatactgtagataaacaaacaagcaataaagataaaaaaatgcataataat
cactatgatgctaaaacgggtgatacaaaaagtaatatagatagatctaaacataaagca
agtgacacaagtaaattatcacagagacgagaagaaagtacaaaacagagtactgacaag
gagaaagaaagacataagagccatagtaaaagcaacaaaaggaatagaaaagatcatcat
aattctgagagaaaagacaaagaaagatctcggcatgaatcagattccagagatagacat
cgtccttcttctagtaaagataaaaacaggaaaaaaaacaatcgtgataataaagaccct
tcgtgtcaaaatagagatcattcggattcgcggaaatataggcatacttctccaaagaca
gatcgaaacaatcatcataaatctagccggcatgataaacataaatcaaaatcaaattta
tccagttctgtatcgaataaacatacatctagcaaaagcgacaggaagcatcaatcggaa
tcaagtcggagattaaatgattcttccagaaaatctagcaaatataaagaaaatagtagt
gaaaggaattcattcggtagtcctgcagacagtattcattcttttatggacgaagagatt
ttggaattatcagattctgatcatgatgtacaagaagaatgcctaagaatatttcaggaa
tatcaagcttctgatcatccaaaattagtatcaatcaaaaaatctttgaaagaagaaacc
gaagatatggaagaagttggtaagaaaagagttgcgcatccttcagcggctacaagcgtc
actagacagtctggtcctagtcagccaccaaaaaagcttataacaccacaacagaaaatg
tacgagcgatggcgtttgatgaagaaagtagcaaccggaaaggccgcggaaaaggcgata
gctgaaatgaagactcaagttacatctatgtcagcagttcagtcctcaagtaatttacaa
aaagaacatatcgagtccgcgtcgtcaacaaacaataacgatctgcaatcgaatgtgaat
agtcgtgttagaattgctcatgttccgtatgcacaatctcttgcaatggaaaagaaaaag
gtcacagtaacagcagaaaagtgcagggaccacaaagaagtaaataacaaaacaatagcg
caaactacgaaaggcagtgtacgcgtcgctcacattccgcaaatagtacctcaactggta
cgtccagaaccgctccaagtcgctacgcagaaatttcccttaaatgttcgtcagtattat
attaatataatgcacgatatatgcgtgcaaatttatacgaatagtgatgatgcagcgcaa
cgtgccattaaagaggaactcacatgtcacgaaaaatgtaaggcgcttgctgtatacaaa
agttcgtgtatgctggcagttcataggctgaggaaagaagttgatcagaataaatcgaat
gaaaaatccgttggattgaactatggtatgatatctcacgaagccatgcttgctggcaaa
tcgagaggctcttggagcatagtcaagagtaaaaagagtgtggtagattttaaaggacct
gcattctacaatatgctcaagaaatgggtcatgtctgaggagcagctcagagataatggg
tttccacgaagacatccggatgatacaaagggacgagcaaaggtatatgtaataaatgca
cggaaccaaagtgttttatcaaaagtgcctaatcaaagaatatgcagtcgatgtggccaa
gcgtatatggtaaataaacagggctttgctgtaccacaacaaaactgtatatatcactgg
ggaagaaaatttacaattaaaggcgagggcaagtacagttgttgccaacaatacggatca
gctactggttgctgtgatgcaaaaacacatgtgtgggattacacagattatgaaaatctt
cgcggttatgttagaactttatcaaaagacgtttctatggacgaacaaggtgtctatgca
ctcgattgtgaaatgtgttatactacatatggtttagaattgactagagtgacagtgatt
gatgaagattgtaacgtaatatatgaaacattggtcaaaccacaaaatccgataattgat
tataacacaaggttctcagggattacagaagaagatatgaaggacgtgacgacgactatt
ttagatgtacaagctacacttctcacaatgttttcggacaaaacagtcctggtgggtcat
agccttgaaagcgattttaaagctttgagactgcttcacgataccgttgtggataccagc
gttatatttccacataagaatggatatccgcaaaaacgggcattgaaaaatctctgttct
gaatatctcagaaaaatcatacaaaatgacatcagtggtcatgacagtaaagaagatgcc
gtcgcttgtatggagttaattcgctggaaagtgaaggaagcagcgaaattacagtaa |