Polyergus mexicanus: 138932886
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Entry
138932886 CDS
T10742
Symbol
Msh6
Name
(RefSeq) probable DNA mismatch repair protein Msh6
KO
K08737
DNA mismatch repair protein MSH6
Organism
pmec Polyergus mexicanus
Pathway
pmec03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
pmec00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
138932886 (Msh6)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pmec03400
]
138932886 (Msh6)
DNA repair and recombination proteins [BR:
pmec03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
138932886 (Msh6)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_I
MutS_IV
MutS_II
TPR_24
Motif
Other DBs
NCBI-GeneID:
138932886
NCBI-ProteinID:
XP_070151260
LinkDB
All DBs
Position
Unknown
AA seq
1125 aa
AA seq
DB search
MPKVNTILNYFTSPKNVKKPEAKKEQVENPLTPKTEQRKKELTGNNEKENQNTNDKKRLH
KKNDDKEENEPIRIKRRRLIIPDDDSDEDTENEFKLDSKCKESESILEKDIEHESSTETE
EDTPKEKKRTSNSVKSKPEQANYSSNKADKKELKQSAQIQSQTVNNGPVAAHVWPHLKLD
FLQPDKIRDIQRRTLKDPNYDPRTLYVPIDFLNNQTPAMRQWWELKSKHFNCVLFFKVGK
FYELYHMDAVISVNELSLTYMRGEFAHSGFPEIGYGRYSASLIERGYKVARVEQTENPEM
MAARCSKMTKSTKFDKVVKREICQISTRGTRVYTPLDVEASTPNSNYLLSLIERCDPGQT
TNSFGICFIDTTIGEFNLSQFDDDYCNSRLLTLLAHHPPVHVIYERGNLSRKTLQLINNT
LPAALKESLQREAQFWSATTTLKNLHEGDYFKKGKDCNFAWPEGLKSYLNEGDSLGLTPA
NNKELAVHALGGCVYLLKEFLLEQQLLAQGCFNTYIPPDFSAANNRASLNYINTMVIDAV
TIKNLKLFGENSLNSVLDHCCTAFGKRLLHEWICRPSCRKDIIMKRQEAVQELVDRIDMI
QSARAILSTLPDLERLLSKIHAQGNAARMKNHPDGRAIMFEGPTYSKRIIVEFTMTLAKF
EEVLKFIELFNDFKSNLISHCTQYEPDGDFPHLRKILDYFKSAFDHEEAKKQGCIVPKKG
VDVEYDLVLDELAKNKKDIDKYLEKQKRHFDANITFFGTDKKRYQIEIPESRVKKVGPGY
ELQSQRKGFKRYYTVEAKELLARQINTEEHRDKVLKDLNRRIFAQFSEKYDMWHVAIYKI
AIMDVLISLADYARNGDMCIPKIHDGLNGEIFIKIKDGKHPCIVSDNFIPNDTLLACDDA
ASFMILTGPNMGGKSTLMRQVGLITIMAQIGSYVPASSCCITLVDRIFTRLGANDDILTG
QSTFLVELNETATMLQHATPYSLILLDELGRGTSTYDGTAIAASVVDTLTKLKCRTLFST
HYHSLVEDYKTNKEVTLAHMACMVETSEEENVSQETVTFLYKLNEGACPKSYGFNAARLA
GIPSIITKKAHEIANKIEQETNDKHIFIALCKANSAQMRNFITAL
NT seq
3378 nt
NT seq
+upstream
nt +downstream
nt
atgccgaaagtaaatacgatacttaattatttcacgtctccaaaaaatgtcaaaaagccg
gaggcgaagaaagagcaagtagaaaatccgctaacaccaaagacagaacaaaggaaaaaa
gagcttactggaaataatgagaaagaaaatcaaaatactaatgataaaaaaagattacat
aaaaagaatgatgataaggaagaaaatgagcctataagaattaaaagaagacgcctaatt
attcctgatgatgattctgatgaagacactgaaaatgaattcaagctagattccaaatgt
aaagaatctgagtcaattttggaaaaagacatagagcatgaatcttcaacagaaacggaa
gaagatacaccaaaagaaaaaaaaaggacatccaacagtgttaaatccaagccagaacaa
gcaaattattcatctaataaagcagataaaaaagaattgaaacagtctgcacaaattcaa
agtcagactgtgaataatggacctgttgctgcacatgtttggcctcacttgaaattagat
tttctgcaaccagacaaaataagggatatacagaggagaacattaaaggatccaaattat
gatcctagaacactttatgtaccaatcgatttcttaaacaatcaaactcctgcaatgagg
cagtggtgggagttaaaaagtaagcattttaactgtgtacttttcttcaaagttggcaaa
ttctacgagttgtaccatatggatgcagttatcagtgttaatgagcttagcctcacatat
atgcgaggtgaattcgcacactctggatttcccgaaatcggttatggtcgttattcggca
agcctcatagaaagaggttacaaagttgcacgagtcgagcaaacagaaaacccagagatg
atggcagcgcgctgcagtaaaatgactaagtcaacaaaattcgataaagttgtaaagcga
gaaatttgtcaaatcagtacaagaggcactagagtgtacactccattagatgtggaagca
tctacaccaaactccaattatctgttatctttaatagaaagatgcgatcctggtcagaca
accaactccttcggaatatgctttatagacacaacaataggcgaatttaatctcagtcaa
tttgacgatgattattgtaattccagattattgactctgctggctcatcatccaccagtg
catgtaatatacgaacgcggtaatttatcgcgaaaaactttgcagcttataaataacact
ctaccagcagcgctaaaagaatcgctacaacgcgaagcacaattctggtctgctacaact
acattaaaaaatcttcatgaaggcgattatttcaagaaggggaaagattgcaactttgca
tggcctgaaggtttaaaatcatatcttaatgaaggagatagcttgggtttaacaccagcc
aataataaagaattagcagtacatgcattaggaggatgtgtgtacttattgaaagaattt
ctgctcgaacagcaactattggcacaaggttgctttaatacttacattccaccggatttc
tcagctgcaaacaatcgcgcaagtctcaattatataaataccatggtgatagatgctgtt
acaataaaaaatttaaagctttttggagagaattcactcaatagtgttttggatcattgt
tgtactgcatttggcaaaagattgttgcatgaatggatctgtaggccatcttgtcgtaaa
gacattataatgaaacgtcaggaagctgtgcaggaattggtagatcgaatagacatgata
caatcagctcgcgcaattttgtcaactctgccagatcttgaaagattattaagcaaaata
catgctcaaggaaatgcagctagaatgaaaaatcatcctgatggcagagcaataatgttt
gaaggcccaacatattcaaagagaataattgtagagtttaccatgacactcgctaaattc
gaagaagttttgaaatttattgagctatttaatgattttaaaagtaacctgataagccac
tgtactcaatatgaaccagatggtgatttccctcatttaaggaaaatattagattatttt
aagagcgcatttgatcatgaagaagccaaaaagcaaggttgcattgttcctaaaaaagga
gtagatgtcgaatatgatttagtcttggatgaacttgcaaagaacaaaaaagatatagac
aaatatttagaaaaacaaaaacggcattttgatgcaaacataacattttttggaacagat
aagaaacgttatcaaatcgagattcctgagtcgcgagttaagaaagttggtcccgggtat
gaactacagtcacaaagaaaaggttttaaacgttattatactgtcgaggcaaaggaactt
ttagcaagacagataaatacagaagaacatagagataaagtactaaaggatcttaacagg
agaatatttgcacagtttagtgaaaagtatgatatgtggcatgtagccatttacaaaata
gcgatcatggacgtgctcatttctctcgcggattacgctcgaaacggcgatatgtgtata
ccgaagattcatgacggattaaatggtgagatctttatcaagataaaagatggaaaacat
ccttgtattgtatctgataactttattcccaatgatactttattggcatgtgatgatgct
gcctcctttatgattctgacaggaccgaatatgggaggcaagtcaactctcatgcgtcaa
gtcggcttaatcacaatcatggcgcaaataggcagctatgttccagctagttcatgttgc
ataacattggtggatcgtattttcacacgtttgggtgccaacgatgatattctgactggt
cagagcacatttttggttgaattgaacgaaactgccacgatgttacaacatgctacgccc
tattcattaattcttctcgatgagttgggacgtggcacgtcaacctatgacggcacggca
atagcggcttcggttgtcgatacattgactaagttaaaatgtcgcacattattctcgact
cattatcattctttagttgaggattacaaaaccaataaagaggttacattagcccatatg
gcatgcatggtagaaacgagcgaagaagaaaacgtatcacaagagacagtgacattctta
tacaagcttaatgaaggagcttgtccgaaatcttatggattcaatgccgctcgattagca
ggtataccgtctattatcacaaagaaagcacatgagatagccaacaagatagaacaagaa
actaatgacaaacatattttcattgctctttgtaaagccaacagtgctcaaatgaggaat
tttattactgctctttaa
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