Polyergus mexicanus: 138932992
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Entry
138932992 CDS
T10742
Symbol
Hel25e
Name
(RefSeq) ATP-dependent RNA helicase WM6
KO
K12812
ATP-dependent RNA helicase UAP56/SUB2 [EC:
5.6.2.7
]
Organism
pmec Polyergus mexicanus
Pathway
pmec03013
Nucleocytoplasmic transport
pmec03015
mRNA surveillance pathway
pmec03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pmec00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
138932992 (Hel25e)
09122 Translation
03013 Nucleocytoplasmic transport
138932992 (Hel25e)
03015 mRNA surveillance pathway
138932992 (Hel25e)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pmec03019
]
138932992 (Hel25e)
03041 Spliceosome [BR:
pmec03041
]
138932992 (Hel25e)
Enzymes [BR:
pmec01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
138932992 (Hel25e)
Messenger RNA biogenesis [BR:
pmec03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
138932992 (Hel25e)
Spliceosome [BR:
pmec03041
]
Complex C
Other components
EJC/TREX
138932992 (Hel25e)
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
138932992 (Hel25e)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
CMS1
Cas3-like_C_2
Motif
Other DBs
NCBI-GeneID:
138932992
NCBI-ProteinID:
XP_070151474
LinkDB
All DBs
Position
Unknown
AA seq
425 aa
AA seq
DB search
MADNDDLLDYEDEEQTEQVVDGSGDVPAKNKEVKGTYVSIHSSGFRDFLLKPEILRAIVD
CGFEHPSEVQHECIPQAVLGMDILCQAKSGMGKTAVFVLATLQQLELTENQVYVLVMCHT
RELAFQISKEYERFSKYMPHVKVGVFFGGLPIQKDEEVLKTVCPHIVVGTPGRILALVRN
KKLNLKHLKHFILDECDKMLELLDMRRDVQEIFRSTPHSKQVMMFSATLSKEIRPVCKKF
MQDPMEVYVDDEAKLTLNGLQQHYVKLKENEKNKKLFELLDVLEFNQVVIFVKSVQRCMA
LAQLLTEQNFPAIGIHRGMTQEERLSRYQQFKDFQKRILVATNLFGRGMDIERVNIVFNY
DMPEDSDTYLHRVARAGRFGTKGLAITLVSDESDAKILNDVQERFDVNITELPDEIDLAS
YIEGR
NT seq
1278 nt
NT seq
+upstream
nt +downstream
nt
atggcggataatgacgatctcttggattatgaggatgaagaacagactgagcaagtagtc
gatggaagtggagatgttcctgcaaagaacaaagaagtaaagggcacatatgtttctatc
cacagcagtggatttagagattttcttcttaaaccagagattttacgtgctattgtcgat
tgtggttttgaacatccatccgaagtacaacatgaatgtattcctcaagcagtacttggc
atggatatactgtgtcaagcaaaatctggcatgggaaaaactgctgtgtttgtattagct
actcttcaacagctagaattaacggaaaatcaagtctatgtcttagtgatgtgtcacact
cgagaactagctttccaaatcagtaaagaatatgagaggtttagtaaatacatgccacat
gtaaaagttggtgtatttttcggtggcttacctattcagaaagatgaggaagtcttgaaa
actgtatgtcctcatattgttgttggcactcctggtcgtatcctcgctcttgtacggaat
aagaaattgaatctgaaacatctgaaacattttatacttgatgaatgtgacaaaatgctt
gagttgttagatatgcgcagagatgtacaggaaatatttagaagcacgccacatagtaaa
caagtcatgatgttcagcgccacattatccaaggaaatacgtcctgtctgcaaaaagttc
atgcaagatcccatggaagtctatgtcgatgatgaggcaaaactcactttaaacggtctg
caacaacattacgttaaattgaaggagaacgagaagaacaagaagttgtttgaactactt
gatgttcttgaatttaatcaggttgtcatatttgtcaagtctgtccaaagatgcatggct
ttagcgcaactcttgacagaacagaatttccctgcgattggaatccataggggtatgacg
caagaagagcgattatctagatatcaacagtttaaagattttcaaaagcgtattttggta
gcaacaaacttatttggacgaggtatggatatagaacgtgtgaacattgtattcaactat
gacatgccggaagattccgacacatatttacatagagtggcgcgcgctggtcgttttggc
acaaagggtcttgccattacactagtgagcgatgaaagtgatgccaagatattaaatgat
gttcaagaaaggtttgatgtaaatataacagaattaccggacgaaatcgatcttgcttca
tacattgaagggcgatga
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