Polyergus mexicanus: 138933010
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Entry
138933010 CDS
T10742
Name
(RefSeq) nonsense-mediated mRNA decay factor SMG7
KO
K14409
protein SMG7
Organism
pmec Polyergus mexicanus
Pathway
pmec03015
mRNA surveillance pathway
Brite
Messenger RNA biogenesis [BR:
pmec03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Other surveillance factors
138933010
mRNA cycle factors
Common to processing body (P body) and stress granule
138933010
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Other DBs
NCBI-GeneID:
138933010
NCBI-ProteinID:
XP_070151518
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Position
Unknown
AA seq
1168 aa
AA seq
DB search
MGLKAAVQALKKAEPLKDKVQRCKDLLNDNDAWVCQQQLQNIYQQVLILDLEYALDRKVE
QELWNLGFKNYIATLQSQAKDRKNPKRGESQALLSWCLEAASGFYLTLLQEICTVFDLDL
PFRRKGYVYGCTSPWKAVEKLSPPHKSSCFYACQYCLVHLGDIARYRNESKQAEMFYRHA
VSLSPSSGQPYNQLALLEASRGDKLGTVFHYARSVAVKHPFPVAMANLATTLSSALNDKS
FNIDGKTKLNSQEYIAVFLKLHGIIHNFGDLKLACSYSKQLTETLTALVATESFSPWMLI
QMLVINLYALQHATGIGNDSIESFRNEQLTNDEKLARDCILDLIAGTLSALLLPVYTIKS
SIIEYFALPSIKLCLDWVNIKPTVLEEVAFTSRLQIWPSLCVLLNALQNCVVDFKHDEYI
VVPLPEDRDLQGFLPLEKSFESLRFTNTALEGDIAMLNKLRAIRILNLGRCLTQNRINGS
APISITIEEKTGDSKFTSTSNGVGPSNELMKELEELSLNKESKQLNTSMSPVLSEAASSK
SSVETDIEISADKKIFQGILKPQGSLERNRDSVTSVIETSSGEACSLPCARKPRQNIAMQ
AIMRRAESEQKQVTFKNVSPVIVEEENDKKVKAAVIPISTSITNKPAPILEMPKANETSN
ANTLVSASNRLSAMPLAPSAGSQSQSALVQGQQRPVKLPPNIPMPAQLVVVKEQQTQQML
PQLHTSSIAASQQTPTLGPVCYPTQSFNAQNPQFANNFMTNRLPLTPNAPHYQIQGQLSN
NGQPVSTISQSINGIQHSINQSRPLHQRMPQNMSHSPAQMLQQNLRLGSPAQPSMLPQNM
NLPANNMGLQASINVEQQNHAIGLQHQQQNMMQSNSRSNSMHNQLNMNSSSSMANVSTMM
STLSVYEKEPQQSNITTLINSQSPTSGSNFQLNFNQNHFNRNQTFVGQGSLPQSQPSPSF
YKNNPDAMDFQFPNQTKIVNKTQQPQQQPVTNNYNMFCNYEPTEHFNLWRDSRPPQPPIA
WWGSSGNTAAQIHMKDSTVNDNAFSNWSDSSVLGNMASRVPLTPGKNYQQQQQNGQHGRH
LMTGNNFEDSRLFELEQKPSQPVSTGNTYSLFSSNTWSTVNTPINTNSTGQDQMKARLHQ
QSLWSGPGPSPLERLLEQQKSLREGGTT
NT seq
3507 nt
NT seq
+upstream
nt +downstream
nt
atgggcctaaaggcagctgttcaggctctgaagaaagcggaaccattgaaagataaggtc
caacgctgcaaggatttgttgaacgataatgacgcctgggtatgtcagcagcagttgcaa
aacatataccaacaggtcctcatattggatttggaatatgccctggacaggaaagtagag
caagagctgtggaatcttggatttaagaattatatagcgactctgcaatcacaggccaag
gacagaaagaatcccaagcgtggtgaatcgcaggcgttgcttagctggtgcttagaggca
gctagtgggttttatttgaccttgctgcaagaaatttgcactgtatttgatttggatctg
ccatttagaaggaaaggttatgtatatgggtgcacatccccatggaaggctgttgaaaaa
ttatccccgcctcacaaatcatcttgtttttatgcttgccaatattgtcttgtacatctg
ggtgatattgcacgatacagaaatgaaagcaagcaagctgagatgttttatagacatgcc
gtttcattatcaccatccagtgggcaaccttataatcaattggcactcttggaagcatcc
cgcggtgacaaattgggaacggtgtttcattatgcacgttcggtagctgtcaagcatccc
tttcccgtcgccatggcgaatctcgccacgactctgtcctccgccttgaacgacaaatct
ttcaatatcgacggcaaaaccaaattgaactctcaggagtatatcgctgtctttctgaaa
cttcacggaataattcacaattttggcgatttaaagcttgcgtgctcgtatagtaaacag
ttgacagaaacgttaaccgcattggtcgctaccgagagtttcagtccatggatgttaata
caaatgttggtaatcaatctatatgctctgcaacatgcgaccggaattggcaatgatagc
atagaatcgttcagaaacgagcaattgaccaatgatgaaaaactggcccgtgactgtata
ttggatctaattgcgggaactctgtctgctttgttgttacccgtttatacgataaaaagc
tctatcatcgagtattttgcgttgccttctataaaactgtgccttgattgggtcaacata
aaacctacggttttggaagaagttgcttttacatcaagattacagatatggcccagcctc
tgtgtgcttctgaatgctctgcaaaattgtgtggtggattttaagcatgacgagtatatt
gtagtgccactgccagaagatcgcgatcttcaaggtttcttaccattggaaaagagtttc
gaaagtctcagatttacgaatactgcgctagaaggcgacatcgcgatgttaaacaaatta
cgggccatacgcattctgaatttgggccgttgtctcactcaaaatcgaatcaatggatct
gcgccaatctcgattacgatagaggagaaaacaggtgatagcaaattcacatccacaagc
aatggcgttggacccagtaatgaattgatgaaggaactcgaagaacttagcctgaacaaa
gaatcgaaacaattgaacacttcgatgagcccggtactatctgaagcagctagtagcaaa
agttctgtggaaactgacatcgagatttcggcagataagaagatttttcagggcattctt
aaaccccagggttccttagaacggaaccgagactcggtaacaagcgtcatagaaacgagc
agcggcgaggcgtgttctcttccgtgcgcaaggaaaccgcggcagaatatagcgatgcag
gcaattatgcggcgcgcggagtctgagcaaaaacaggtgacgttcaagaatgtatcacct
gtgatcgtcgaagaagagaatgataagaaggtgaaagcagcggttattccgatcagtact
tccataacgaataaaccggcaccgattttagagatgcctaaagctaacgaaacttccaat
gcaaacactctcgttagcgcttcaaatcgactatcggcaatgccgctcgctccatccgct
ggttcacagagccagtctgcattggttcagggtcagcagagacctgtgaagttgccgcct
aacatccccatgcccgcgcaattggtagtagtcaaagagcaacaaactcagcaaatgctc
ccgcaattacacaccagtagcatagcggcgagtcaacagaccccgacgttgggaccggtt
tgctatccgactcaatcgtttaacgcgcagaatccgcaatttgccaacaactttatgacg
aaccgactaccgttgacgccgaacgcgccacattatcagatacagggacaacttagtaac
aatggacaacctgtttccacaatatcgcagagcatcaacggaatacagcattcgatcaat
cagagcagaccattacatcagaggatgccgcagaacatgtcccatagccctgcgcagatg
ttacagcaaaacttgcgattaggttcgcccgctcagccaagcatgttgccgcaaaatatg
aatctgccagcgaataatatggggctacaagcgagcataaacgtggagcaacagaatcac
gccattggattgcaacaccaacaacagaatatgatgcagagcaattctagatcgaatagc
atgcataatcaattgaatatgaatagtagttcaagtatggcaaatgtatcgactatgatg
tcgacattgtccgtatacgagaaagaaccccaacaatccaatataacaacgctaatcaat
tcgcaaagtccaacgagcggatctaactttcagcttaatttcaatcagaaccactttaat
cgaaatcagactttcgtcggtcagggctcattgccgcaaagtcagccatcgccgtcgttt
tataaaaataatcccgacgcgatggattttcaattcccgaatcaaactaagatagttaac
aagactcaacaaccacagcaacagccagtgacgaataattataacatgttctgcaattac
gagccgacagaacactttaacttatggagggacagtcgaccgccccaaccgccgatcgct
tggtggggttcgtctggtaataccgcggctcagatccatatgaaggattccactgttaac
gataatgcattctcaaactggagcgattcgtctgtcctcggaaatatggcaagtagggtg
ccgttgacgcctggtaaaaattatcagcagcaacagcaaaacggacaacacggcaggcat
cttatgacaggaaataatttcgaggattccagattgtttgaactcgaacagaagccgtcc
caacccgtgagtaccggcaatacttattccttgttcagcagtaatacatggagcaccgtt
aatacgccgatcaatacgaattcgactggtcaagaccagatgaaggcacgactccatcag
caatctctatggtctggaccgggtccttctccgttagagcggcttctcgagcaacaaaag
tcgctacgcgagggcgggaccacttga
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