Polyergus mexicanus: 138933511
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Entry
138933511 CDS
T10742
Symbol
Prp40
Name
(RefSeq) pre-mRNA-processing factor 40 homolog A-like
KO
K12821
pre-mRNA-processing factor 40
Organism
pmec Polyergus mexicanus
Pathway
pmec03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pmec00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
138933511 (Prp40)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pmec03041
]
138933511 (Prp40)
Spliceosome [BR:
pmec03041
]
Complex A
U1 snRNP components
U1 related factors
138933511 (Prp40)
Complex B
138933511 (Prp40)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
FF
WW
WW_TCERG1
RhoGAP-FF1
FF_RHG35_4th
HVO_2833_C
Spherulin4
Motif
Other DBs
NCBI-GeneID:
138933511
NCBI-ProteinID:
XP_070152360
LinkDB
All DBs
Position
Unknown
AA seq
837 aa
AA seq
DB search
MASNDGIPPPAAVPGFSSATPNIASSFVPPIMPAAPFIPPPSLPPGPPGIMPPQFSIPPP
GFTFPITAAPSPEAGVIAASPHITAPGIPPPSPIANDATTSTMSVSTSEKKTDWSEHKAP
DGRTYYYNSITKQSLWEKPDELKTPNELLLSQCPWKEYKSENGKIYYHNVTTKESRWTIP
PELEELKTRILAEEAAAVAAAAVANATNSNIVPVAMQHLSPNITTISQTSTPEPGGKSAI
EQAMAATLAAINIPTPPTKPDEDSNSAMGSANDSRTSTPEPKMQFKDKKEAIEAFKELLK
ERDVPSNATWEQAVKLIQNDARYPQMKKLNERKQVFNSYKTQKLKEEREQERLRLKKAKE
DLEQFLLENDRMMSTTKYYKCEELFGNLEIWRAVGDSDRRDIYEDVIFNLAKREKEEAKQ
LKKRNTKRLAQVLDTMTEVTYRTTWQEAQALLLQHPAFAEDADLLEMDKEDALIVFENHI
RQLEKDEEEEKECEKKRRKRQERKNRDGFIYLLDELHEQGKLTSMSLWVELYPMLSADLR
FSAMLGQSGSTPLDLFKFYVEDLKSRFHDEKKIIREILKDKNFEVQVNTTFEEFATVVCE
DRKSATLDAGNVKLTYNLLLEKAEAREKERVKEETRKFKKLETGFKNLLKTLNVDYQMTW
EEVRAKIEEEQDFKAITLESERIRIFKEYQHELEESCSHHHIRSKKKKAKKLKRKSRSRS
HSESEGSDKGLKRKRHKSRSPSIPSKSDSSESETRKSKRKKNKRKRGRSHSRSHSRLASS
EEASPERKRKEEKHRRPSVHSEGSVTENNEHHELSEDELEKQRAQLLRELQMQQEEN
NT seq
2514 nt
NT seq
+upstream
nt +downstream
nt
atggcttccaacgatggtattccgccacctgccgccgtaccaggattctcatcggcaacg
ccaaatattgcatctagctttgtgccacccattatgcctgcggcacccttcattcctcct
cccagtctaccgccaggtcctcccggtataatgccacctcagttttccatacctccgcca
ggttttacttttcccatcaccgctgcaccttctccagaggctggagtcatagccgcatcg
ccgcacataacagcaccagggattcctcctccttcacctatcgccaacgacgctaccact
tcgacgatgtctgtctccacgtcggagaagaagaccgattggagcgaacataaagcaccg
gatggcagaacgtattactataatagtattacaaagcaatcgttatgggaaaaaccggac
gaattgaagaccccaaatgaattgttgttgtcgcagtgtccttggaaggaatataaatcg
gagaatggcaaaatatattatcacaatgtaacaacgaaggagtccagatggacgatacca
ccggaactggaagagctgaaaactcgaatcctggccgaggaagctgcagcggtcgccgcg
gccgctgtagcaaacgccacaaattccaatatagttcctgtagccatgcaacacttatca
cccaatatcacgactatatcacagactagtacgccagagccaggtggaaagtctgccatc
gagcaagcgatggccgcaaccctcgcggcgattaatatcccgacgccacctacaaaaccg
gacgaggatagcaattccgcgatgggctcggctaatgacagtcgtaccagcacccccgag
ccaaagatgcaatttaaagataaaaaggaagcaattgaggcatttaaagaattattaaag
gaaagggacgttccgtcgaatgctacgtgggagcaggcggttaaattgattcagaatgat
gctagatatccacaaatgaagaaattgaatgaacgtaaacaggttttcaattcgtacaag
acgcaaaagctaaaggaagagcgtgaacaagaaagactcagattgaaaaaggcaaaggag
gatctggagcaatttttattggaaaatgatagaatgatgagtacaaccaagtattacaag
tgcgaggaactgtttggtaatcttgagatttggagggccgtcggggattcggatcgccga
gacatttacgaggatgtcatcttcaatctggcaaaacgcgagaaagaggaagcgaaacaa
ttaaagaaaaggaataccaaaagactggcgcaagttctggataccatgaccgaagtgacg
tataggactacatggcaggaagcacaggcactattgttgcagcatcctgcatttgcggaa
gatgcagacttactggagatggacaaggaagatgccttgatcgtcttcgagaatcatatt
cgccaattggagaaggatgaagaagaagagaaggagtgtgagaaaaaacgtaggaaacgg
caggaaaggaaaaacagagatggtttcatatatttactcgatgaacttcacgaacaaggt
aaactcacgtcaatgtcgctgtgggtagagttgtatcccatgctgtccgccgatcttcga
ttttcggctatgctcggacaatcgggttcgaccccgttagatcttttcaaattttacgtt
gaagacttgaagtctcgattccacgatgagaaaaagatcattcgtgagatacttaaagac
aagaatttcgaagtgcaagtcaatacgactttcgaggaatttgccacagttgtgtgcgaa
gaccgaaagtcggccactctagacgcgggtaacgttaaactaacatacaatttattactc
gaaaaagcagaagcgcgcgaaaaggaacgtgtcaaggaagaaacgcgaaagtttaagaaa
ttggagaccggtttcaaaaatttactcaagacgttgaatgtggactatcaaatgacatgg
gaagaggtgagggcgaaaattgaggaggaacaagatttcaaggcgatcactttagaaagc
gaaagaatacgcatattcaaggaatatcagcatgaacttgaggagagttgcagtcatcat
catattagaagcaagaaaaaaaaggcgaaaaaattgaaacgtaaatcacgatcgcgttcg
cacagcgaatcggaaggtagtgacaaaggtttgaagagaaaacggcataagtcacgttca
cccagtattcccagtaagtccgacagttctgaatcggaaacgaggaaatctaagagaaag
aagaacaaacggaagagaggtcgtagtcattctcgctctcattcgagacttgcatcttct
gaggaggcttccccagaaagaaaacggaaagaggaaaagcataggaggccctcagttcac
agtgagggatctgtcacagaaaataatgagcatcatgaactttccgaagacgaactagaa
aaacaacgggcgcaactcttgcgcgaacttcaaatgcaacaagaggaaaattaa
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