Polyergus mexicanus: 138933947
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Entry
138933947 CDS
T10742
Symbol
Rpii140
Name
(RefSeq) DNA-directed RNA polymerase II subunit RPB2
KO
K03010
DNA-directed RNA polymerase II subunit RPB2 [EC:
2.7.7.6
]
Organism
pmec Polyergus mexicanus
Pathway
pmec03020
RNA polymerase
pmec03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
pmec00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
138933947 (Rpii140)
09124 Replication and repair
03420 Nucleotide excision repair
138933947 (Rpii140)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pmec03021
]
138933947 (Rpii140)
03400 DNA repair and recombination proteins [BR:
pmec03400
]
138933947 (Rpii140)
Enzymes [BR:
pmec01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
138933947 (Rpii140)
Transcription machinery [BR:
pmec03021
]
Eukaryotic type
RNA polymerase II system
RNA polymerase II
Core subunits
138933947 (Rpii140)
DNA repair and recombination proteins [BR:
pmec03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase II complex
138933947 (Rpii140)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_1
RNA_pol_Rpb2_2
RNA_pol_Rpb2_7
RNA_pol_Rpb2_4
RNA_pol_Rpb2_3
RNA_pol_Rpb2_5
Motif
Other DBs
NCBI-GeneID:
138933947
NCBI-ProteinID:
XP_070153324
LinkDB
All DBs
Position
Unknown
AA seq
1178 aa
AA seq
DB search
MSNIFALEDDQYDDEDAEEISSKLWQEACWILINAYFDEKGLVRQQLDSFDEFIEMSVQR
IVEDSPQIDLQAEAQHTTGEIENPVRHLLKFEQIYLSKPTHWEKDGAPSPMMPNEARLRN
LTYSAPLYVDITKTIVKDGEDPVETQHQKTFIGKIPIMLRSKYCLLAGLSDRDLTELNEC
PLDPGGYFIINGSEKVLIAQEKMATNTVYVFSMKDGKYAYKAEIRSCLEHSSRPTSTLWI
NMMAKSGASIKKSAIGQRIIAIIPYIKQEIPIMVVFRALGFVADRDILEHIIYDFDDPEM
MEMVKPSLDEAFVIQEQNVALNFIGTRGAKPGVTKEKRIKYAREILQKEMLPHVGISDFC
ETKKAYFLGYMVHRLLSASLGRRELDDRDHYGNKRLDLAGPLLAFLFRGLFKNLMKEVRL
YAQKFIDRGKDFNLELAIKTKIITDGLRYSLATGNWGDQKKAHQARAGVSQVLNRLTFAS
TLSHLRRVNSPIGRDGKLAKPRQLHNTLWGMLCPAETPEGAAVGLVKNLALMAYISVGSQ
PSPILEFLEEWSMENLEEIAPSAIADATKIFVNGCWVGIHRDPDQLMATLRKLRRQMDII
VSEVSMIRDIRDREIRIYTDAGRISRPLLIVEGQNLLLKKRHIDMLKERDYNNDGWQELV
GSGVVEYIDTLEEETVMIAMSPDDLKQDKEYAYCTTYTHCEIHPAMILGVCASIIPFPDH
NQSPRNTYQSAMGKQAMGVYITNFHVRMDTLAHVLYYPHKPLVTTRSMEYLRFRELPAGI
NSIVAILCYTGYNQEDSVILNASAVERGFFRSVFYRSYKEAESKKIGDQEEQFEKPSRLT
CQGMRNAIYDKLDDDGIIAPGIRVSGDDVIIGKTITLPETDDELDSTTKRFTKRDASTFL
RNSETGIVDQVMLTLNSEGYKFCKIRVRSVRIPQIGDKFASRHGQKGTCGIQYRQEDMPF
SCEGLTPDIIINPHAIPSRMTIGHLIECIQGKVSANKGEIGDATPFNDAVNVQKISTLLQ
EYGYQLRGNEVMYNGHTGRKINAQVFLGPTYYQRLKHMVDDKIHSRARGPVQILVRQPME
GRARDGGLRFGEMERDCQISHGAAQFLRERLFEVSDPYRIHICNFCGLIAIANLRNNTFE
CKGCKNKTQISQIRLPYAAKLLFQELMAMNIAPRLMIH
NT seq
3537 nt
NT seq
+upstream
nt +downstream
nt
atgagcaatatatttgctctcgaggacgatcaatatgatgatgaggatgcggaagaaatt
tcgtcgaaactttggcaggaagcctgttggattcttattaacgcgtattttgatgagaag
ggacttgtacggcaacaattagacagtttcgacgaattcatcgaaatgtctgttcaacgc
atagtagaagattcaccacaaattgatttgcaagcagaagcacaacacactacaggcgaa
atagaaaatcctgtgagacatttattgaaatttgaacaaatttatttatctaagccgact
cattgggagaaagatggtgctccgtctcctatgatgcctaatgaagccagactgagaaat
ttaacatattctgcgccattgtatgtagacattactaaaactattgtaaaagatggcgag
gatcctgttgaaacgcagcatcagaagacatttattggcaaaataccaattatgttaaga
tcaaaatattgtttgctcgctggcttatccgatcgcgatttaacagaattaaacgaatgc
ccgttagatcccggtggatatttcattattaatggttcggaaaaggtacttattgctcaa
gagaaaatggcgacaaatactgtttacgtattcagtatgaaagatggtaaatatgcttac
aaggcggaaatcagatcgtgtttggaacatagttcgcgacctacttcaactttatggatt
aatatgatggctaagagtggcgctagtattaaaaagtctgctataggtcaacgcatcatc
gccatcattccatacatcaaacaagaaatacctataatggtagtctttcgagctctcgga
tttgtagctgatcgcgatatcctcgaacatattatttacgatttcgacgatccggaaatg
atggaaatggtgaagccatctttagatgaagcttttgttatacaggaacaaaatgtggcc
ttgaattttattggtacaagaggtgccaagccgggcgtaactaaagaaaaacggattaag
tacgccagagaaattttacaaaaggagatgctgccgcatgttgggataagtgatttttgt
gaaactaaaaaggcttatttccttggttacatggtacacagattattatcagcgtcttta
ggacgaagagaattagacgatcgtgatcattacggtaataagagattggatttggccggg
cctctgttagcgtttctatttcgtggattatttaaaaatctaatgaaagaagtgcgtttg
tacgcacagaaatttatagatcggggaaaagattttaatctcgaattggctattaagacg
aaaattatcactgacggtctaagatattcgcttgctacgggaaattggggcgatcagaag
aaagcgcatcaggcaagagcgggcgtatcacaggtattgaatagattgactttcgcatcg
acgttatcgcacttgaggcgagtaaactctcctattggaagagatggtaaacttgccaaa
ccacgtcaattacacaatacattatggggtatgctctgtcccgcggaaactcccgagggt
gctgctgtaggattggtgaaaaatttagctttgatggcgtacataagcgtcggttcgcag
ccttctcctattcttgaattcttggaggaatggtccatggagaatctcgaagaaatagca
ccgagcgcaatcgccgatgctacgaagatatttgtaaatggatgctgggtcggcattcac
agagatccggatcaattaatggctactttacgcaaattgagaagacaaatggacattatt
gtgtcggaggtatccatgattcgtgatatcagagatcgtgaaataagaatatacacagat
gctggaagaatcagtaggcctttgctcatagtggaaggacagaacctgttattgaaaaag
agacacattgatatgctgaaagaaagagattataataatgacggctggcaagaattggta
ggtagcggcgtagtagaatatatagacacactggaagaagaaactgttatgatagccatg
tcacctgatgatcttaaacaagacaaagaatatgcatattgtacaacatatacgcactgt
gaaattcatccagcgatgatcttgggcgtgtgcgcttctattataccattccccgatcat
aatcaaagtcctagaaatacttatcagagcgctatgggtaaacaagctatgggtgtatat
ataacgaattttcacgtgcgcatggatactttagctcatgtactgtattatcctcataaa
cctctggtcacgacaagatccatggaatatcttaggttccgtgaattaccagcgggtatc
aatagtatcgtcgcgatcttgtgttacacgggatataatcaagaagatagcgttattttg
aatgcgagcgctgttgaaagaggcttctttagatcggtgttttatcgctcttataaggaa
gccgagtcgaaaaaaattggcgatcaggaagaacaatttgaaaaaccttcacgtttaact
tgccaaggaatgcgtaatgctatatacgataaattggatgatgacggaatcattgctcct
ggtattcgagtatcaggcgatgatgtaattataggaaaaacaattaccttgccagaaaca
gacgacgagttagatagtacgacgaaacgttttacaaaacgggacgcttcgaccttctta
cgaaacagtgagactggcatagtcgatcaagtaatgttgacgttgaacagtgaaggatat
aaattttgcaaaattcgagtgcgcagcgtacgtattccacaaattggtgacaaatttgcg
tcgcgtcatggacaaaagggtacatgcggcattcagtataggcaagaagatatgccgttc
tcatgcgagggtcttacccccgatattattattaaccctcatgctatcccttcacgtatg
actatcggtcacttgatagagtgcatacagggaaaagtgtctgccaacaaaggagagatt
ggcgatgctaccccatttaatgatgctgtaaatgtgcaaaagatttccacgcttctacaa
gaatacggttaccaattgcgaggaaatgaagtgatgtacaatggacacacaggtcgcaag
attaatgcgcaagtctttttaggaccgacgtattaccaacgcttgaagcacatggtagac
gataaaattcatagtagagcgagaggacctgtgcaaattttagttagacaacctatggaa
ggtcgagcaagggatggaggacttcgttttggagagatggagcgggattgtcaaatttct
cacggtgcggcacaatttctgcgagaacgtctcttcgaagtgtcagatccatatcgaatt
catatctgtaatttctgtggcttaattgccatagcgaatttacgaaacaatacctttgaa
tgtaaaggatgtaaaaacaagacacagatttcccaaattagactaccatatgcagcaaag
ttgctcttccaggaactcatggcaatgaatattgcacccagacttatgatacattga
DBGET
integrated database retrieval system
