Polyergus mexicanus: 138934064
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Entry
138934064 CDS
T10742
Symbol
Wdr33
Name
(RefSeq) pre-mRNA 3' end processing protein WDR33 isoform X1
KO
K15542
polyadenylation factor subunit 2
Organism
pmec Polyergus mexicanus
Pathway
pmec03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
pmec00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
138934064 (Wdr33)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pmec03019
]
138934064 (Wdr33)
Messenger RNA biogenesis [BR:
pmec03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
138934064 (Wdr33)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_WDR3_1st
Beta-prop_THOC3
Beta-prop_WDR5
WD40
Beta-prop_IFT122_1st
WD40_CDC20-Fz
WD40_Prp19
Beta-prop_EML_2
WD40_WDHD1_1st
Beta-prop_EML
WDR55
Beta-prop_WDR3_2nd
Beta-prop_CAF1B_HIR1
WD40_Gbeta
Beta-prop_IFT140_1st
EIF3I
Beta-prop_WDR36-Utp21_2nd
ANAPC4_WD40
Beta-prop_WDR36-Utp21_1st
Beta-prop_TEP1_2nd
ASA1
Beta-prop_WDR90_POC16_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_Aladin
Beta-prop_RIG_2nd
Beta-prop_WDR19_1st
DSE1_N
Beta-prop_EIPR1
CFAP251_N
WD40_MABP1-WDR62_1st
WD40_RFWD3
eIF2A
WDR90_beta-prop_4th
Beta-prop_WDR35_TULP_N
Beta-prop_WDR75_1st
Beta-prop_Vps41
Beta-prop_NOL10_N
Beta-prop_HPS5
Beta-prop_SCAP
Beta-prop_DCAF4
PEP5_VPS11_N
Beta-prop_WDR41
Beta-prop_WDR11_2nd
PAC11
WD_LRWD1
Beta-prop_SPT8
Beta-prop_ACSF4
WDR54
Motif
Other DBs
NCBI-GeneID:
138934064
NCBI-ProteinID:
XP_070153569
LinkDB
All DBs
Position
Unknown
AA seq
1051 aa
AA seq
DB search
MSATTQFANPPPAVSLPNMSVPPPTAPNLSAPPPNLTTINTSGSYQHRYPNHREGSRGFF
KPFRPYHAPKVVAGGQDTLQDEFDGKRLRKSVMRKTVDYNSAIIKSLENRVWQRDYRDRR
ALQPDVIYYPDLLPPPSYIDNPINAVTTRFVKTATNKMRCPIFCMAWTPEGRRLVTGASS
GEFTLWNGLTFNFETILQAHDSPVRTMVWSHNESWMVTGDHAGYVKYWQSNMNNVKMFQA
HKEAIRGLSFSPTDHKLATCSDDGTVRIWDFLRCHEERILRGHGADVKCVHWHPQKSLVI
SGSKDNQQPVKLWDPKTGQSLATLHAHKSTVMDVKWNENGNWLVTASRDHLLKLFDLRNL
SQEVQTFRGHKKEASSVAWHPSHEGLFCSGGSDGAILFWHVGADKEVGAIEQAHDSIVWT
LAWHPLGHILCSGSNDHTSKFWTRNRPGDLMRDKYNLNTLPAGSAGIDDHEIADEAAVIP
GMGPEDRINADSESEDKSSGIPGLDLDHAVDEGKKFANKKVPYSKPIPRNFQAQWNEMEA
EDMEQVEALNAFVNQLIETTPGAVPLNEVTPNAIILYGKMIPVETDSKLAEAISKGTEAI
NKLVFSGEIEELRDVVGPPDNVDEAEEYLQDDGEIDYSKVPDIDLPPPLPSSKFAQNPEL
LKTLNRGGKRKFDQLIGWSDGGASDRTSKIHQPVFGGIPITEDSQSSDTDLRFGKSNAAE
ANSFQDEDHRRGGSHSDSARSGSRGDEDLRFGRTVSCNEYELSRGNNFADKDFRNIGFPP
KKLLDMDDMYDERDRDGGRWTDDEKSMGDGPRKSDGTYASFGDKRDNGIATMGPGGMGNS
IHGHMAGMAHLQANHHNMQNINPNMPPPIPSLVPHPGMTQHPGMQGKPPHPGLDGPIPPH
MMPHHPNMHHPGFGPNGPPPPGGFGPSFRPPPNGNFGPNHFRPSPMPPFGPNHQGPPPPF
GNNFQGPPNAFRGPNAGPMNFDRPGFGPNFRGQNPQAQLNNFNSNFGNFGKNGPNRGMNR
GGDNMGRSGYSNRGRGRDNDQSRGGRGRDNY
NT seq
3156 nt
NT seq
+upstream
nt +downstream
nt
atgtctgcaactactcagtttgcgaatccgccaccggctgtaagcttacccaatatgtct
gtgccaccgccaacagctccaaatttatcagcgccaccaccaaacttaactacaattaac
acatcgggtagctatcagcatcgttatccgaaccatagagagggcagtcgcggtttcttc
aagccgttcagaccttatcatgctccaaaagtcgtcgctggaggacaagatactctgcag
gatgagtttgatggaaaaaggcttaggaaatccgttatgcgaaagactgtcgattacaat
tcggccatcatcaaaagtttagaaaatcgcgtatggcagcgggactacagggatcgtcgc
gcacttcagccagacgtaatatactatcccgatttactccctccgccaagttatattgac
aatccaataaatgcagttaccacgaggttcgtaaaaacggctaccaataaaatgcgttgt
ccgattttttgtatggcctggacaccagagggtagacgtcttgtcactggtgcttcgagt
ggagaattcacactgtggaatggccttactttcaattttgaaactattctgcaggcacac
gacagcccagtaaggacaatggtatggtcgcacaatgagagctggatggtaacaggggac
catgcaggctatgtaaaatattggcagagcaatatgaacaacgtcaagatgtttcaagcg
cacaaagaagcgattagaggtctcagtttcagtccaacggatcacaaattggcgacttgc
agcgatgacggaactgtcagaatttgggattttcttcgctgtcacgaggaacgaattctc
agaggtcatggtgcagatgtcaaatgcgttcattggcatccgcaaaagagtctagtcatt
tccggcagcaaggacaatcagcaaccggtgaaactgtgggatccgaagaccggacaatcc
ctggcgactttgcatgcgcataagtcgaccgtgatggatgtaaagtggaacgagaacggt
aactggttggtgaccgcgtcgagagatcatctgttaaaactgttcgatctgaggaatctt
agtcaagaagttcagacgttccgcggtcataagaaggaggcgtctagcgttgcttggcat
ccgagccatgaaggtctcttctgtagcggtggtagcgatggtgccatactcttttggcat
gtgggagcggataaagaggtaggagcgatagaacaggcgcatgatagcatagtatggacg
ttggcttggcatccgttgggacatattttgtgttccggcagcaacgatcacacatccaaa
ttttggacgcgcaacagaccgggagacctgatgagagacaaatacaatctcaatacgtta
ccggctggatcggctggcattgacgatcatgaaatcgccgatgaagcagcggtgatacct
ggtatgggaccggaggacagaatcaacgccgacagtgaatccgaggacaagagtagcgga
attccgggtctagacctcgatcatgctgtggacgagggcaaaaagtttgccaacaagaaa
gttccgtacagcaaaccgataccacgaaacttccaagctcaatggaatgaaatggaggct
gaggatatggagcaggtcgaagcacttaacgcgttcgttaatcaattaatagagactacg
ccaggcgctgtgccattgaacgaagttacgcccaacgccattatactatatgggaaaatg
attcctgtggaaacggattcgaaattggcggaggcgattagtaaaggaaccgaagccata
aacaaattagtattctccggtgagatagaggagttacgagacgtggtgggtccaccggat
aacgtggacgaggccgaagaatatctgcaagatgacggcgagatcgactattccaaagta
ccagatatagatctgccgccacccttacctagctcaaagtttgcacagaatcctgagctg
ttgaaaacgctgaatcgcggcggcaagcgtaagttcgatcagctaatcggttggagtgat
ggcggagctagcgatcgtacgtccaagatccatcagccggttttcggcggtattccgatt
acggaagattcgcagtccagcgatacggatttaagattcggcaaatctaatgccgcggag
gccaactccttccaggacgaggaccacagaagaggcggttcgcacagtgattccgcgagg
agtggcagtcgcggcgacgaggatctgaggttcggtagaaccgtttcgtgtaacgagtac
gagttgtcgcgtggcaacaatttcgcggacaaggacttccgcaacatcggtttcccgcct
aaaaagctgctggacatggacgatatgtatgacgagcgggatcgcgacggcggtcgctgg
accgatgatgagaagagcatgggcgacggtccgcgcaaatcggatggcacgtatgccagc
ttcggtgacaaacgcgataacggcatagctacgatgggcccgggcggcatgggtaacagc
atacacggccacatggccggcatggcgcatttgcaggcgaatcatcataacatgcagaat
attaatcctaacatgccgccaccgataccgagtttggtgccacatcctggaatgacgcaa
catcccggaatgcagggcaaaccaccgcatcccggtttggacggcccgataccgccacat
atgatgccgcatcatcccaatatgcatcatccaggcttcgggcccaacggacccccgcca
cccggtggtttcgggcccagcttccggccaccgccgaacggtaatttcgggccgaatcac
ttcaggccgagcccgatgccaccattcggaccgaatcatcagggtccgccgccgccgttt
ggcaacaattttcaggggccgcctaacgcctttcgtgggcccaacgctggtcccatgaac
ttcgatcggccgggcttcgggcccaattttcgcggtcagaatccgcaagctcagttgaac
aatttcaactccaattttggcaactttggcaaaaacggacctaatcgcggcatgaaccgc
ggtggtgacaacatgggcaggagtggctacagcaatcgcggtagaggacgcgataacgat
cagtcgagagggggaagaggaagggacaattattaa
DBGET
integrated database retrieval system
