KEGG   Polyergus mexicanus: 138934400
Entry
138934400         CDS       T10742                                 
Symbol
Cstf50
Name
(RefSeq) cleavage stimulation factor subunit 1
  KO
K14406  cleavage stimulation factor subunit 1
Organism
pmec  Polyergus mexicanus
Pathway
pmec03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:pmec00001]
 09120 Genetic Information Processing
  09122 Translation
   03015 mRNA surveillance pathway
    138934400 (Cstf50)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:pmec03019]
    138934400 (Cstf50)
Messenger RNA biogenesis [BR:pmec03019]
 Eukaryotic type
  mRNA processing factors
   3' end processing
    Cleavage stimulation factor (CSTF) complex
     138934400 (Cstf50)
SSDB
Motif
Pfam: Beta-prop_WDR5 WD40 Beta-prop_THOC3 Beta-prop_WDR3_1st WD40_Prp19 WD40_CDC20-Fz CSTF1_dimer WD40_WDHD1_1st WDR55 WD40_Gbeta Beta-prop_EML_2 Beta-prop_WDR3_2nd Beta-prop_TEP1_2nd Beta-prop_WDR36-Utp21_1st Beta-prop_WDR36-Utp21_2nd ANAPC4_WD40 Beta-prop_CAF1B_HIR1 Beta-prop_WDR90_POC16_2nd EIF3I Beta-prop_EML WD40_MABP1-WDR62_2nd WD40_MABP1-WDR62_1st Beta-prop_Aladin Beta-prop_WDR75_1st Beta-prop_SCAP Beta-prop_RIG_2nd Beta-prop_VPS8 Beta-prop_EIPR1 Beta-prop_TEP1_C WD40_RFWD3 Beta-prop_DCAF4 Ge1_WD40 WDR90_beta-prop_4th Beta-prop_IFT140_1st NBCH_WD40 Beta-prop_HPS5 Beta-prop_NUP159_NUP214 Beta-prop_Vps41 Beta-prop_IFT122_1st Beta-prop_NOL10_N Beta-prop_WDR75_2nd PROPPIN Beta-prop_NWD2_C Beta-prop_RSE1_2nd Cytochrom_D1 Beta-prop_WDR19_2nd
Other DBs
NCBI-GeneID: 138934400
NCBI-ProteinID: XP_070154195
LinkDB
Position
Unknown
AA seq 464 aa
MVCVALTIFIKAGNIQSPSGNTTNQGAMKEPEVDPKNMIKSRELLYRLMISQLFYDGHQT
LAVQLSNMIQAEPPCPPSDRLLHLMLIGAAHEPDRSKKDNSNNLSTFASSFDNTLGPGLD
LEFETETQTQAPEPAQYETAYVTSHKGNCRAGAFSADGQLIATGSVDASIKILDVDRMLA
KSAPDEMAPGDQTGGHPVIRTLYDHLEEVTCLEFHPREPILVSGSRDFSVKLFDFSKASV
KKAFRTITDADQIRCLSFHPTGDFLIVGTNHPVVRLYDVNTAQCFVCSIPSHQHTAGITS
IKYSPDAKTYASAGKDGSIKLWDGVSNRCINTFVKAHDGYEVCSVTFTRNGKYLLSSGKD
SLIKLWELSTSRCLIAYTGAGTTGKQEHKAQAIFNHTEDYVMFPDEATTSLCAWNSRNAS
RKQLLSLGHNGPVRLIVHSPTAPAFLTCSDDFRARFWFRRMPTH
NT seq 1395 nt   +upstreamnt  +downstreamnt
atggtatgcgttgctttgacgatcttcataaaagcaggcaatattcagtcaccatcggga
aacacgacgaatcagggcgcgatgaaggaaccagaagtggatccgaagaacatgataaag
agcagagaactgctctacaggctgatgatcagtcaattattctatgatggccatcaaacg
ttagccgtgcaactgtccaacatgatacaagcggaaccgccgtgtccaccctcggatcga
ttgcttcatttaatgttaatcggtgccgcgcacgagccggatcgttccaagaaggataac
agcaacaacctgtccacattcgcgtcgagcttcgacaacactttaggacctggactagac
ttggaatttgagacggagactcagactcaggccccggaaccagcgcagtacgaaactgcg
tatgtcacatcccataaaggaaattgcagggcaggagccttctcagcagacggacaatta
atagctacaggctctgtggatgcttcgatcaagatcttggatgtggataggatgctcgcc
aagtccgcaccggacgagatggcgcccggagatcaaaccggtggccatccagtcataaga
acattgtacgatcacttggaagaagtgacatgtttagagtttcatcctagggaacctata
cttgtgtctggtagtcgcgacttttctgtaaaactattcgattttagtaaagctagtgtc
aaaaaggcgttcagaaccatcacggatgctgatcaaatccggtgcttgtcctttcatcct
actggagattttcttatagtcgggactaaccatccggtagttagattgtatgatgtgaat
actgcacagtgcttcgtgtgtagcataccgagtcaccaacatacagctggaataacaagt
atcaagtattcacctgacgcaaagacttacgcatcggctggaaaggacggcagcatcaaa
ctttgggatggtgtgtcgaatcgatgtataaataccttcgtgaaagcacacgatggttac
gaagtatgctcggtgaccttcacaaggaacggcaagtatttactatcctcaggaaaagat
tccttgataaagttgtgggaattgtctactagcagatgtttaatagcatatacaggtgct
ggaaccacaggtaaacaggaacacaaggcacaagctatctttaatcataccgaagattat
gtaatgtttcccgacgaagccacaacttcattgtgcgcctggaattctcgtaatgcgtca
cgaaagcagttactgtctttgggtcacaacggtcctgtgagactaatcgtgcactcacca
actgctcccgctttcttgacatgtagtgatgattttagggcaagattctggtttcgaaga
atgccgactcactag

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