Polyergus mexicanus: 138934722
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Entry
138934722 CDS
T10742
Name
(RefSeq) exosome complex component RRP43 isoform X1
KO
K12586
exosome complex component RRP43
Organism
pmec Polyergus mexicanus
Pathway
pmec03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pmec00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
138934722
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pmec03019
]
138934722
Messenger RNA biogenesis [BR:
pmec03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
138934722
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
FimH_man-bind
Motif
Other DBs
NCBI-GeneID:
138934722
NCBI-ProteinID:
XP_070154845
LinkDB
All DBs
Position
Unknown
AA seq
275 aa
AA seq
DB search
MDLQYKTIHPVKYLQDHLVQGSRPDGRKFLSFRPVSINVSSIIQADSSAIFKLGDTSAVC
GIKAELAIPRADIPDHGYLVPNVELSPLCSSKFRPGPPSEQAQVLSKSIDIILSNSRVLD
LKDLCICKNKLVWVLYCDILCLNFNGSVIDACIGAIIAALKTLTLPEVNYNNETGVIVVH
SENRKAFPVKTFPVSASFAIFEKQLLLADPSDDEEDLSSARFFIVMDDEEEICYIHKPGG
IAISQNLLCKGLEMTKIRAKLVRSVINAAISTLNK
NT seq
828 nt
NT seq
+upstream
nt +downstream
nt
atggatttacaatacaaaacgattcatcctgtgaaatatttacaagatcatcttgtacaa
ggcagtcggccggacggtagaaaattcttatcgtttaggccggtaagcataaatgtttca
tcgattattcaagcagacagttcagcgatatttaagttgggtgacacaagtgcagtttgt
ggtattaaagctgaattagcgataccaagggcagatattccagatcatggttatttagta
ccaaatgtagaattatctcccctgtgttcttcaaagtttcgtccaggcccaccgagcgaa
caagcacaagtgctttctaaatcaatagatattatattaagcaattcgagagtgcttgat
ttaaaagatctttgcatctgcaaaaataaattagtatgggtcttgtactgtgatatctta
tgtttaaatttcaatggctcagttatagatgcttgtatcggagcaataattgcagctctt
aaaacgttgaccttacctgaagtaaactacaacaatgaaacaggagtaattgttgtacat
tcagaaaatagaaaagcatttcctgtaaaaacatttccagtttctgcatcatttgcaata
tttgaaaaacaactgttgctagccgatccttcagatgatgaagaagacttgtcatcggca
agattttttattgtgatggacgatgaagaagaaatttgttatatacataaacctggtgga
attgctatctctcagaatttactttgcaaaggactagaaatgacaaaaataagagcaaaa
ttagtcagatcagtaatcaatgctgcaatctcgacactaaacaaataa
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