Polyergus mexicanus: 138934959
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Entry
138934959 CDS
T10742
Name
(RefSeq) putative transcription factor SOX-15
KO
K09270
transcription factor SOX7/8/10/18 (SOX group E/F)
Organism
pmec Polyergus mexicanus
Brite
KEGG Orthology (KO) [BR:
pmec00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pmec03000
]
138934959
Transcription factors [BR:
pmec03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
138934959
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HMG_box
HMG_box_2
HMG_WDHD1
Motif
Other DBs
NCBI-GeneID:
138934959
NCBI-ProteinID:
XP_070155232
LinkDB
All DBs
Position
Unknown
AA seq
711 aa
AA seq
DB search
MDAHGWNLAEMCQRYHHAIPAAAAQNSSPARDPSAAIVQGLSTATHIDQASPSYSHYTML
DNYDRGEVTPPPPPSVSGYGGSPGLLALHSSLYATPTSRAYDIDSGIDGNDSSMPIDTQI
ISIPSMLSGPAQQRLEDMPWLASGPSLEYQQGISPIPAGVKMCHPGGGTAQRSLKEQRIR
RPMNAFMVWAKVERKKLADENPDLHNADLSKMLGKKWRGLTPQDRRPYVEEAERLRVIHM
QEHPNYKYRPRRRKHAKRTPGAPSSPPSATNTAGNRSNPTGPTIHHSMSKMDSYQGISQI
PWGGHSPISSLYHQQQQQSIQEYKSENNSLYGSPYTPIIHTPDISPVASPEPDGDGGHLS
SAQNPDPERDLMEGTSKQHGDMTDQKRYTFMSSDNQLHTGHASNTSVSSCQNSGGYTDTL
TYKKSVGYLNFERQSTSIAAVGIANGMMVSCNKLRSGFDNVGSVTGTFYPPVASPHDQSL
QHYSGTQSSKSATNYSMQSTVESNYNPVQCAGNRQQSIGIRGAESCSGTVTHRYQMPHHQ
EYQTDSSSAQQHTILGGHIDPGMNAEEDHQQQALQLEKYFKYSHPTSVTHSSLSSQSMLD
SNHNYASDLRYYGAPSQLDMSNSQCIVDDQQSSKDARCSNVAIGHTMEQYHQQNLEVSKY
PDHSTSQQQHQQPQSQQQQQQQQPQNMEHMSKADDDFSVILADVRKTCYSS
NT seq
2136 nt
NT seq
+upstream
nt +downstream
nt
atggatgcccatgggtggaacttggccgaaatgtgccagcgttaccatcacgctataccg
gcagcggcggcgcagaattcctcgccagctagggatccctcggctgccatcgtgcaaggc
ttgtcaaccgccacgcacatcgatcaagccagcccgtcttattcccactacacgatgctg
gataattatgacaggggtgaggtgacaccaccaccaccaccatcggtgagcggttacggc
ggttctcccggactcttggcacttcattcctcgctttacgcgactcccacgtcgagggcc
tacgacatcgactccggcatcgatggcaacgacagctcgatgcccatcgatacccaaatc
atctcgataccgagcatgctaagcggtccggcgcagcagcggctggaggacatgccctgg
ctggcttccggtccgtcgttggaataccagcagggcatctcgccgatccccgcgggagta
aagatgtgccatcccggcggcggcactgcccagaggagcctcaaggagcaacggatacgt
cgtccgatgaacgcgttcatggtctgggcaaaggtcgagcgcaagaagttggccgacgag
aatccggatctccacaacgccgatctcagcaagatgctcggaaagaaatggcgaggactg
acgccgcaagacagaaggccctacgtcgaagaggccgaaaggcttcgggtcatacatatg
caagaacatccgaattacaagtacagaccgcggcgtaggaagcacgcgaaacggacaccc
ggtgcaccgtcttcgcctccctcggcgaccaacaccgcgggcaacaggtccaaccctact
ggcccgacgattcatcattccatgtccaagatggacagttaccagggcatatctcaaatc
ccgtggggtggccattccccgatctcatccctgtatcatcaacaacagcagcagagtatc
caggaatacaaatcggaaaataattcgctttacggcagcccatacacgcccatcattcac
accccggacatatctccggtggcgagtcccgagcctgacggtgacggcggccatctatcg
tctgctcagaatccggatccggaacgagatctgatggaaggtacctcgaagcaacacgga
gatatgaccgatcagaaacgatacacctttatgagtagcgacaatcaattgcacactggt
cacgctagcaatactagcgtatcgtcgtgtcagaattccggcggttatacggatacttta
acatataaaaaatccgtgggttatttgaattttgagagacaatctacgagcatagccgcg
gtgggcattgcgaatggtatgatggtatcgtgcaacaagttacgctccggttttgataac
gttggctccgtcacgggcacgttttatccaccggtcgcctcgccgcacgatcaatctttg
cagcattacagcggcacgcaatcgtccaagagcgcgacgaactattcgatgcagtccact
gtcgagagcaattataatccggtccaatgcgccggcaatcgacagcagtccatagggatt
cgcggagccgaaagttgttccggcacagtgacacaccgataccaaatgccgcatcatcag
gaatatcagacggactcgagcagcgctcagcagcacacgattcttggcggtcacatcgat
cccggcatgaatgctgaggaagatcatcagcagcaggcattacagttggaaaagtatttc
aaatattctcatccgacgagcgtgacacactcgagcctgtcctcgcagagtatgttggac
agcaatcataactacgccagtgatctacgctattacggggcaccgtcccagttggatatg
tcaaactctcagtgcatcgttgacgatcaacagagcagtaaggacgctcgttgttctaac
gtcgcgatcggtcatacaatggagcaatatcatcaacagaatctagaagtatccaagtat
ccggatcactcgacttcgcaacaacagcatcaacagccgcaatcgcaacagcaacagcag
cagcagcagcctcaaaatatggaacatatgtccaaggctgacgacgatttcagtgttata
cttgcggatgtgcgcaagacttgctacagtagctag
DBGET
integrated database retrieval system
