KEGG   Polyergus mexicanus: 138935025
Entry
138935025         CDS       T10742                                 
Symbol
Csl4
Name
(RefSeq) exosome complex component CSL4
  KO
K07573  exosome complex component CSL4
Organism
pmec  Polyergus mexicanus
Pathway
pmec03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:pmec00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    138935025 (Csl4)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:pmec03019]
    138935025 (Csl4)
Messenger RNA biogenesis [BR:pmec03019]
 Eukaryotic type
  mRNA degradation factors
   3'-5' decay
    Core exosome factors
     138935025 (Csl4)
 Prokaryotic type
  Archeal mRNA degradation factors
   Exosome components
    Core exosome
     138935025 (Csl4)
SSDB
Motif
Pfam: ECR1_N EXOSC1 S1_RRP4
Other DBs
NCBI-GeneID: 138935025
NCBI-ProteinID: XP_070155371
LinkDB
Position
Unknown
AA seq 200 aa
MNEQEELIVCVPGQRLCVSDKVNIAGSGTYEQQGYIYSKLAGIVKLITNEKTRTVEVHGI
TEQSIVPAPGDIVTAVVTIVNQRFCKCSIKCVGDIVLTRPYRGILRKEDVRAVDKDKLEM
YKCYRPGDIILARVMPMTEAHTYQLSTAENELGVVIAHSEEGVAMVPISWTQMQCPKSLC
KEFRKVAKVVPEHVVAEHTK
NT seq 603 nt   +upstreamnt  +downstreamnt
atgaacgaacaagaagaacttatcgtttgtgtaccaggtcaaagattatgtgtatctgac
aaagttaatatagccggatctgggacatatgagcagcagggttatatttattcgaagctt
gctggcattgtaaaattaataacaaacgaaaaaactcgtacagttgaggtacacggtata
acggagcagagtatcgttcctgcaccaggggatattgtgacagctgtagtcactatagtt
aatcagagattttgtaaatgtagcatcaaatgtgtaggtgacatagtattgacgagacct
tatagagggatattaagaaaagaagatgttcgagcagttgacaaagataaactagaaatg
tataaatgttatcgacctggagatattattcttgcaagagttatgccaatgacagaagca
catacttatcaattgagtactgcggaaaatgagctaggagttgttatagcacatagtgaa
gaaggcgtagccatggtaccaattagctggacacaaatgcaatgtccaaagtctttgtgc
aaagaattccggaaagttgctaaagttgtaccagaacatgttgtggcagaacatactaaa
taa

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