Polyergus mexicanus: 138935025
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Entry
138935025 CDS
T10742
Symbol
Csl4
Name
(RefSeq) exosome complex component CSL4
KO
K07573
exosome complex component CSL4
Organism
pmec Polyergus mexicanus
Pathway
pmec03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pmec00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
138935025 (Csl4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pmec03019
]
138935025 (Csl4)
Messenger RNA biogenesis [BR:
pmec03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
138935025 (Csl4)
Prokaryotic type
Archeal mRNA degradation factors
Exosome components
Core exosome
138935025 (Csl4)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ECR1_N
EXOSC1
S1_RRP4
Motif
Other DBs
NCBI-GeneID:
138935025
NCBI-ProteinID:
XP_070155371
LinkDB
All DBs
Position
Unknown
AA seq
200 aa
AA seq
DB search
MNEQEELIVCVPGQRLCVSDKVNIAGSGTYEQQGYIYSKLAGIVKLITNEKTRTVEVHGI
TEQSIVPAPGDIVTAVVTIVNQRFCKCSIKCVGDIVLTRPYRGILRKEDVRAVDKDKLEM
YKCYRPGDIILARVMPMTEAHTYQLSTAENELGVVIAHSEEGVAMVPISWTQMQCPKSLC
KEFRKVAKVVPEHVVAEHTK
NT seq
603 nt
NT seq
+upstream
nt +downstream
nt
atgaacgaacaagaagaacttatcgtttgtgtaccaggtcaaagattatgtgtatctgac
aaagttaatatagccggatctgggacatatgagcagcagggttatatttattcgaagctt
gctggcattgtaaaattaataacaaacgaaaaaactcgtacagttgaggtacacggtata
acggagcagagtatcgttcctgcaccaggggatattgtgacagctgtagtcactatagtt
aatcagagattttgtaaatgtagcatcaaatgtgtaggtgacatagtattgacgagacct
tatagagggatattaagaaaagaagatgttcgagcagttgacaaagataaactagaaatg
tataaatgttatcgacctggagatattattcttgcaagagttatgccaatgacagaagca
catacttatcaattgagtactgcggaaaatgagctaggagttgttatagcacatagtgaa
gaaggcgtagccatggtaccaattagctggacacaaatgcaatgtccaaagtctttgtgc
aaagaattccggaaagttgctaaagttgtaccagaacatgttgtggcagaacatactaaa
taa
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