KEGG   Polyergus mexicanus: 138935232
Entry
138935232         CDS       T10742                                 
Symbol
Rfc4
Name
(RefSeq) replication factor C subunit 2
  KO
K10755  replication factor C subunit 2/4
Organism
pmec  Polyergus mexicanus
Pathway
pmec03030  DNA replication
pmec03410  Base excision repair
pmec03420  Nucleotide excision repair
pmec03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:pmec00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    138935232 (Rfc4)
   03410 Base excision repair
    138935232 (Rfc4)
   03420 Nucleotide excision repair
    138935232 (Rfc4)
   03430 Mismatch repair
    138935232 (Rfc4)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:pmec03032]
    138935232 (Rfc4)
   03036 Chromosome and associated proteins [BR:pmec03036]
    138935232 (Rfc4)
   03400 DNA repair and recombination proteins [BR:pmec03400]
    138935232 (Rfc4)
DNA replication proteins [BR:pmec03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   RFC (replication factor C)
    138935232 (Rfc4)
  DNA Replication Termination Factors
   ELG1-RFC complex
    138935232 (Rfc4)
Chromosome and associated proteins [BR:pmec03036]
 Eukaryotic type
  Sister chromatid cohesion proteins
   CTF18-RFC complex
    138935232 (Rfc4)
DNA repair and recombination proteins [BR:pmec03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    RFC (replication factor C)
     138935232 (Rfc4)
  Check point factors
   HRAD17(Rad24)-RFC complex
    138935232 (Rfc4)
SSDB
Motif
Pfam: Rep_fac_C AAA DNA_pol3_delta2 AAA_lid_RFC1 RCF1-5-like_lid AAA_22 Rad17 AAA_14 AAA_16 nSTAND_NTPase5 Mg_chelatase Viral_helicase1 AAA_11 AAA_assoc_2 AAA_19 RuvB_N AAA_18 nSTAND3 AAA_24 DNAX_ATPase_lid MeaB ABC_tran MipZ NTPase_1 AAA_28 AAA_5 IstB_IS21 AAA_29 Gp44_lid AAA_25 SRP54 AAA_7 AAA_23 AAA_3
Other DBs
NCBI-GeneID: 138935232
NCBI-ProteinID: XP_070155787
LinkDB
Position
Unknown
AA seq 351 aa
MAGDDAVDEAMETEILPSTSNSDAKITEKNNKSKNLPWIEKYRPQVFSDIVGNEDTVSRL
AVFAQHGNTPNIIIAGPPGVGKTTTILCLARILLGPAFKEAVLELNASNERGIDVVRNKI
KMFAQKKVNLPKGKHKIIILDEADSMTDGAQQALRRTMEIYSHTTRFALACNNTEEIIEP
IQSRCAMLRYGKLTDAQILAKVLQVCEKENISYTDDGMEAIVFTAQGDMRQALNNLQSTY
NGFNHVNGENVFKVCDEPHPLIVKDMLDDCIKGNISKACTVIDHFWKMGYSAEDIISNVF
KVCKNHAMDEKLKLKFVKEIGITHMGIVEGINSLLQLHGLVAKLCRVCVNN
NT seq 1056 nt   +upstreamnt  +downstreamnt
atggcaggggatgatgctgttgacgaagctatggagactgagattttaccatctacaagt
aacagcgatgcgaaaattacagaaaaaaacaataaatctaaaaatttaccatggatcgaa
aaatatcggccacaagtattctccgacattgttggcaatgaagacactgtatccagatta
gctgtttttgctcaacatggaaatactccgaatattattattgctggtccacctggagtc
ggcaaaactactacaattttgtgtttggcacgtattctattgggaccagcatttaaagaa
gctgtacttgaattaaatgcttcaaatgagagaggaatagatgtagtgaggaataaaatc
aaaatgtttgcacaaaaaaaagtaaatcttcctaaaggaaaacataaaatcattattttg
gacgaagcggatagcatgactgatggtgcgcaacaggcattgcgtcgtacaatggaaatt
tatagtcatacaaccagatttgctcttgcatgtaataacacagaggagattattgaacct
atacaatcacgatgtgctatgttaagatatggaaagttaacagatgcccaaatcttagca
aaagttctccaagtttgcgaaaaagaaaatatttcctacacagatgatggcatggaagca
atagtgtttacagcccaaggggacatgagacaagctttgaataatttacaatctacatat
aatggatttaatcatgtcaatggcgagaatgtatttaaagtgtgcgacgaacctcatcct
ttaattgtcaaagatatgctggatgattgtataaaaggaaatatttctaaagcatgcacg
gtaattgatcatttctggaaaatgggatattctgcggaagatataatcagtaatgtattc
aaagtttgtaaaaatcatgctatggatgaaaaactgaagttgaaatttgttaaggaaatt
ggaataacgcatatgggaatagtggaaggtatcaatagtttgttacaattacacggtctc
gtggcaaaactttgccgcgtatgtgtaaataattga

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