Polyergus mexicanus: 138935892
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Entry
138935892 CDS
T10742
Name
(RefSeq) superkiller complex protein 3
KO
K12600
superkiller protein 3
Organism
pmec Polyergus mexicanus
Pathway
pmec03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pmec00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
138935892
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pmec03019
]
138935892
Messenger RNA biogenesis [BR:
pmec03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Ski complex
138935892
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_14
TPR_1
TPR_16
TPR_19
TPR_8
TPR_2
TPR_CcmH_CycH
TPR_17
CFAP70_TPR_C
TPR_11
TPR_12
ANAPC3
TPR_9
CFAP70_mid_TPR
CABIN1_N
ChAPs
TPR_7
TPR_6
ARM_TT21_C
PknG_TPR
BTAD
Alkyl_sulf_dimr
DUF7017
DUF6584
TPR_21
NitrOD1
Motif
Other DBs
NCBI-GeneID:
138935892
NCBI-ProteinID:
XP_070156887
LinkDB
All DBs
Position
Unknown
AA seq
1298 aa
AA seq
DB search
MSDDIKILLKEARESFKQNEYLETMKKCKKVLKKDKNNYTALILLARAMQEIEEFKSQVA
LVLQKAVEIQPNNPLAWQGLVAYYEKMSQDNDNWEKLALAYCKLLQLDSDFPKFTYFINK
VSEIVLRTKNDDILSQVLDTLSVLREVSTKEKTSLIDKTLAWVLTEYSDNSMTKYHQFYE
HILASVINDTDLVNRQEYYRKYLKMLYDSNKFTILLTAAQDMHFQFPQDACPLEWICCVY
YEKTILNEKDFDINITQIYESLLKLNANSEVALIAKAAYLKSTEKLINSRECLNQAISLN
TQLFYAWLLLSKVYYKLYCWEQTENASKQALQLMKSHLKDKLYCKVKLRLLEAMSRINNK
QKLTQTQQTCEELLKTEPSVQLQLIYARTSVLLDKPDAIAVLSNLESQDEIKIQALILKA
LYLKKHKQYEEAINTLELTLNNSEAWLTFGKIYWDMGDYKHSLMAFLNGVQADRNNWECM
IYLGHYYREHGNDIERSRRCYYTALQINPNSEEAGIGLSTAYRLLKNTDANIQLLQRVTM
QQPTGAKWAWLQLGLQYLDQGDVGQAIKALQHVIRTDPNDNHSWESLADAYLVRGAHTSA
LKSYQRALQLNPEALYPMIQLANIKLLIGQHKEAKEDFESILKNDKPYILALKGLAQACL
GLARENITKQFLCRARENLQQAADNLTDAIMIRSDLSCNWKLLGDVCFRTAGMPEKYCYL
RVKPILMKCDSIEEHMSIRGNEILRLSIRCFCRALSTAQNSALLWHDLACCYLMQLDRDS
TVNKDDTAAKCLAAAKHAVKLCPQSWLHWNILGVICISPYIKNYALAQHCFVMAIDRESN
NAIAWSNLGTLYLHLGDIYRANEAFSRAQRADPGYINSWIGQGIIAENLLRKEAMDLFRH
STELGYHNEAALGYAHWVLTTLLNSAMKRDPLFVYVIEKMHAIPAAVDVLTWYTEHVPND
VYALNTHGLLLERLKLYNTAIKQFIKALKLSQDEEGDMISINLARVLIQVGKHEQAIELC
RQVKRGSFNSQCHLALSLFKAKQYEESYNMYEAALHWMADTETHKANVLCAMAAIAYIFQ
GADAVKTLLFQCIQIKPPTIAGFLATAALGILHNDFNLTSLVLKELKPYTDHHEYGHHII
TLSAYYHVIQGNLTEAIRIFSKAIFRHPNDIKYWVGLVRVSLLNKNLDIFRKCAQTALVL
SRNTSMIDIVYVACASAYSHFGMTEGLRQAQKNIFTYPTNVESWANFIAALLPRCTDKDS
KINNQWMLSLISMIRSQFQTSEYMSQWLLHNTQELNSS
NT seq
3897 nt
NT seq
+upstream
nt +downstream
nt
atgtcagatgacataaaaatcttgctgaaggaagcccgtgagtcttttaagcagaatgaa
tatctggaaactatgaagaaatgtaaaaaggttttgaagaaagataaaaacaattacaca
gcattaattctgttagctcgtgccatgcaagaaatagaggaattcaaatcacaagtagcc
ttggttcttcaaaaagctgtggagatacaaccaaataatccattagcttggcaaggtcta
gtggcatactatgaaaaaatgtctcaagataatgacaactgggaaaagttggctctagct
tactgcaaacttttacaactggatagcgattttcctaagttcacatatttcatcaataaa
gtctcagaaattgtcctgagaaccaagaatgatgacatactgtcccaagtattagataca
ttgagcgtattacgagaagtttctaccaaagagaagacaagtctaattgataagactcta
gcatgggttttaacagagtattctgataatagtatgaccaagtatcatcaattttatgaa
catatattagcatctgtaataaatgatacagatctagtgaatagacaagaatattacagg
aaatatttaaagatgctatatgattcaaataagtttactattttattaacggcagctcag
gatatgcattttcaatttccacaagatgcttgtcctttagaatggatctgctgtgtctat
tatgaaaagactatattgaatgaaaaggattttgacattaatataacccagatctatgag
tctcttttaaagctgaatgcaaattctgaggttgcattaattgccaaagcagcatacttg
aagagcacagagaagttaatcaattctcgcgaatgtttgaatcaagcaatctcattgaat
acgcaattattttatgcctggttattattaagcaaagtatattataaactttattgctgg
gaacaaaccgagaatgcttccaaacaagcattacaattaatgaaatctcatttgaaagac
aaattgtactgtaaagttaagttgagattacttgaagcaatgagtagaattaataataaa
caaaagttgacgcagacacaacagacatgtgaagagttattgaagactgaaccttctgta
caattgcaattgatatatgcacggacaagtgtgttactggataagcctgatgctattgct
gtattaagcaacttggagtctcaggatgaaattaaaattcaagctcttatactcaaagca
ttgtacctaaagaagcacaagcaatacgaggaagccattaacactctcgagctaactcta
aataattctgaagcttggttgacatttggtaagatatattgggatatgggagactacaaa
catagcctgatggctttcttaaatggcgtccaagcggatcgcaataattgggaatgcatg
atttatttgggacattattatcgcgaacacggtaatgacattgaacgttcgagaagatgt
tattatactgcattgcaaatcaatccaaattctgaggaagctggcattggactgagcaca
gcttatcggcttctgaagaacactgatgccaacatacagctattacaaagggtaactatg
caacaacctacaggagcgaaatgggcctggctccaattgggtctacagtatttagatcaa
ggtgatgtgggacaagctatcaaggcattacagcatgtgattagaactgatcctaatgac
aatcatagctgggaatctctggcggatgcatatttagtgcgcggtgctcacacatcggcg
ttgaaatcgtatcaacgtgcgttacagctgaatccagaagccttgtatcccatgatacaa
ctcgcgaatatcaaactgctcattggtcagcataaagaagccaaagaagatttcgaaagt
atattaaaaaatgataaaccatatattcttgcattaaaaggtttagctcaagcatgtttg
ggtctggcaagggaaaatatcacaaaacaatttttatgtcgcgcaagagaaaatctacaa
caagcggcagataatcttacggatgctattatgatacgtagtgatctatcctgcaattgg
aaattacttggcgatgtctgttttagaacagctggtatgccagaaaaatattgctactta
agagttaaacctattttaatgaaatgcgatagtatcgaggagcatatgagcattagagga
aatgaaatactcaggttatcaataagatgcttttgtcgagcattgtcaaccgcacaaaat
tctgcgttgttatggcatgatttagcgtgctgttacttgatgcaattggatcgcgattct
acagtcaataaggacgacacagcagccaaatgtcttgccgctgcaaaacatgccgtcaaa
ctttgtccgcaatcatggctacattggaacattttaggcgttatttgtatatcgccatat
ataaagaattatgctctggctcagcattgtttcgttatggcgatcgatcgagaatcaaac
aatgcgatagcttggagcaatctgggaacattgtatctgcatttaggagatatctataga
gcgaacgaagcattctctcgagcgcaacgtgcggatcctggttatataaatagttggata
ggtcaaggaataatcgcggaaaacttactgaggaaggaagcgatggatttattccggcat
tcgacggaattgggttatcacaacgaagcggctttaggctacgctcattgggtactcacc
acccttctgaattctgcaatgaagagagatccattatttgtttacgttatcgaaaagatg
cacgcaatacctgcagcggtcgatgttcttacctggtatacagaacatgtaccaaatgac
gtttatgctctaaacactcatggtctgctattggaacgattgaaattgtataacacggcg
attaagcaatttatcaaagctttaaaactgagccaggacgaagaaggagacatgatatcc
ataaatttggcacgtgtcctgattcaagtcggaaaacatgagcaagcgatcgagttatgt
agacaagtaaaacgtggaagtttcaattctcaatgccatctggcattatccttattcaaa
gctaaacagtatgaagaatcgtacaatatgtacgaagcagctctacattggatggcggac
actgaaacgcacaaagcgaatgttttatgcgcgatggcagcgattgcttacatttttcaa
ggagcggacgctgtcaaaaccctgctattccaatgcatacagataaaaccgcccaccata
gctggcttcttggcaactgctgctttaggaattctgcacaatgatttcaatttgacctct
ttagtattgaaggaattgaaaccatacacagatcatcacgagtatggtcatcatatcatc
acattgtccgcatattatcatgttattcaaggaaatctcacggaagctattcgaattttc
tccaaagctattttcagacatcctaatgacattaagtattgggtcggtcttgttagagtt
tcattgttaaataaaaatttagacatcttccgtaaatgtgctcagacagcattggtttta
agcagaaatacatccatgattgatattgtatatgtcgcttgcgcatctgcgtacagtcat
ttcggtatgacagagggccttaggcaggctcagaaaaatatatttacatatcccaccaat
gttgagagctgggctaattttattgctgctcttttacctagatgtacagataaggattcc
aaaattaataatcaatggatgttgtcattaatatccatgataagatcacaattccaaact
tctgaatatatgtcacaatggctgcttcataatacacaagaactcaacagttcttaa
DBGET
integrated database retrieval system
