KEGG   Polyergus mexicanus: 138935989
Entry
138935989         CDS       T10742                                 
Symbol
Rig
Name
(RefSeq) gem-associated protein 5
  KO
K13133  gem associated protein 5
Organism
pmec  Polyergus mexicanus
Brite
KEGG Orthology (KO) [BR:pmec00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:pmec03019]
    138935989 (Rig)
   03041 Spliceosome [BR:pmec03041]
    138935989 (Rig)
Messenger RNA biogenesis [BR:pmec03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    eIF4F and regulatory proteins
     138935989 (Rig)
   mRNA cycle factors
    P-body specific factors
     138935989 (Rig)
Spliceosome [BR:pmec03041]
 Other splicing related proteins
  Proteins involved in snRNP biogenesis
   SMN complex factors
    138935989 (Rig)
SSDB
Motif
Pfam: TPR_GEMI5 Beta-prop_RIG_2nd WD40_CDC20-Fz Beta-prop_IFT122_1st Beta-prop_THOC3 Beta-prop_WDR3_1st WD40 Beta-prop_WDR5 Beta-prop_EML_2 Beta-prop_CAF1B_HIR1 WD40_WDHD1_1st WD40_Prp19 Beta-prop_Aladin Beta-prop_RIG_1st Beta-prop_WDR36-Utp21_1st Beta-prop_WDR19_1st DSE1_N EIF3I Beta-prop_EML Beta-prop_WDR3_2nd Beta-prop_HPS5 Beta-prop_TEP1_2nd WDR90_beta-prop_4th WD40_Gbeta Beta-prop_TEP1_C Beta-prop_EIPR1 NBCH_WD40 Paxillin
Other DBs
NCBI-GeneID: 138935989
NCBI-ProteinID: XP_070157101
LinkDB
Position
Unknown
AA seq 1345 aa
MNEIVLPPSPSWYLSSILACSKRGTLAFGAKNYIVIARQKEGHPGLQYSLIKDFVKDKIT
TLAFCPKLDSPDSPELLISGGDEDKVKIWNVDTLELVVEFSFKDGKSIVGVDWSAKDNNL
AYAINSEGFLMYCYISYETSKIIPLGKLTATCLACCPHDSNLIAIGTKNGLIYIVQKETI
LYKLRGHNEEIVSLSWCPSDVNVLNGNDKRDLLLASGAKDRSVFIWKAGGDGRYETVINL
PHAPFPSSSHKSKLGTTGTYIAVCWVEPRVLLTSSLWGELLSWDFPTNKSKPTCKLFHAH
HSRGLFCIAAVPRNDSISDNWRMESELTVWTSAQDRWIICCKRNSDPTESAILEYKIPTQ
GGFIYCMGACSIDTTRIAFGVGDAMLRLWNLSEPHAKTFDVVTHWQKIKGKIRAVSWFPD
DENIIAFGTGEGRVGVFDAIGTFNKPPILYRQYHRNTIYKLEWAMLGSDYYLFSCAEGEL
VAYKKSAPNDEPMSIIKGGCTEFSWKSNFCLAVALENGSIMFYDQNLKKRESTIHYFRSM
VNCLVWHPESTTTDEWTSSTANYLAVASDWSIVIFDMSELIKKMETESAEDCIEKEDSNE
ERKLHASCKIVAMLNGHIDKVVCLAWSPHCSGHLVSGSYDNVAQVWNVKRQELMGTYMGH
DGPVLCCMWSPLKPQLIMTGSSDFMLRIWDYTSPAQLPKQMSDIKIAKKKQKQQKPQKKL
IQNKTDEAENDTTMSNSQPIVYNTKSEVGLPKKKEKNSYFNEYNKIINDKSKVLNFITND
IRKNQEQYEKDSTAATLSLFSEKEHVLELINREKSTQNSSNTAIEMNMWCDNLQNNLMCA
AKDQQLNDFLVSLAPSVSMKMWKEMCEAYAHQLIRQCNVEKAVSYLLCIHKIYEAIEAFL
DANMFKEAYVLARCKLDHNDPFLKKILELWSEWGVFNGHLEQAAYCRVELKQFDKAAKIL
ARRKDVHCLEVASELAFLSGDEGYGMSLIVDAMTRALIKSDWSKARSLIADLRQIQYLNV
HIDAHEAIMSTYKKQAEFDTMRRWLEKKESHGALQTLEMKYNASYYDTLCKNENINAILK
SESRDTMMQVKTTYRIAIAATCDAKETRLKHLATVLGDVYECEEIAIGHGTATSEKFFIQ
ILAKMDIRKPTDEGSIYAKSNYPVSQNIRAYLCIGLLNWLLNYVDQLLIEEETQFIQLIL
DLLGDAINETTLSYQDKIHELGQLEDQLSLLTLDDDVKNDDDCKRIKKEIEKLKLDGNKF
REERVCMPNPKIVFDKACLLANKLNDINRFLLLHSLDKLVKIKEIKLPALEESPSKKLEN
ISQKIDESILKQYKIEINSSISSHK
NT seq 4038 nt   +upstreamnt  +downstreamnt
atgaacgagatcgtgttgccaccctcgccaagctggtatctgagcagcatcctcgcttgc
tcgaaacgtggaaccttggcatttggtgccaagaattatatcgttattgccagacagaaa
gaaggtcatcctggtctacaatattcgctaattaaagattttgttaaggataagataaca
acattggcattctgtcctaaacttgacagtccagatagtccggaattactgatctctggc
ggcgatgaagataaggtcaaaatttggaatgtggatacattagagttggtcgtggagttc
tctttcaaagatggcaaatcaatcgtaggagttgactggtcagccaaagataataatctt
gcgtatgcaataaattcagaaggttttctaatgtattgttatatatcatatgagacatcc
aagataatacctctaggcaagttgaccgctacatgtttggcttgctgtccccacgactcg
aatcttatagcgataggtaccaaaaatggattaatttatattgttcaaaaagaaacaata
ttatataaacttaggggacacaatgaggaaatagtcagtttatcatggtgtccttcggat
gtaaatgttttaaatggaaatgataagagggatctacttttagcttctggtgcaaaagac
agatcggtgtttatttggaaagctggtggagatggtagatacgagactgtgataaattta
ccacatgcgccatttcctagttcttctcacaaaagcaaactcggcacgactggaacttat
attgcagtgtgttgggtagagcccagagtgcttttaacttcttctctttggggtgaactt
ctctcttgggattttcctacaaacaaaagcaagcctacgtgtaaattattccatgcacac
cacagcagaggattgttttgcatagcagctgtacccagaaacgattcaatatctgacaat
tggaggatggaatctgaactcacggtttggacttcggcacaagatcgctggattatatgt
tgtaaacgaaacagcgatcctactgaatcggcgatcctggaatataagattcctacacaa
ggaggattcatctattgcatgggagcttgttccatcgatactacgcgtattgcatttggc
gttggagacgcgatgttgcgtttgtggaacttgtctgaacctcacgccaaaacttttgat
gttgttacacattggcagaagataaaagggaagataagagcggtgtcgtggttccctgat
gatgaaaacataatagcctttggtactggagagggtcgcgttggtgtattcgacgcaatt
ggaacttttaataaaccacctatattgtataggcagtatcatagaaatactatttataag
ctcgaatgggctatgcttggatcggattactatttattctcctgtgcagaaggagaacta
gtggcatacaaaaaatccgcgcctaatgatgaacccatgtccataatcaagggaggatgc
acggaattttcttggaaatccaacttttgcttagcggtcgcgttagaaaatggatcgatt
atgttctacgatcaaaatctgaagaaacgcgaaagtacaatacactattttagatctatg
gtgaattgcttagtgtggcatcccgaaagtacgacaacagatgaatggacgtcgtcaact
gctaattacttggcagttgcctccgattggagtatagtaatttttgatatgtcagaattg
ataaagaaaatggagacggagagtgccgaggattgtattgagaaagaagacagtaatgaa
gaacgcaaactgcacgcaagctgcaagattgtagcaatgttaaacgggcacatcgataaa
gtggtgtgtctagcttggagtccgcattgcagcgggcatttggtgtccggtagttacgac
aatgtcgcacaggtttggaatgttaagaggcaggagctgatgggcacatacatgggtcac
gacggacccgtgctatgttgtatgtggagtcccctcaaaccacaattgataatgaccggc
tcgtcggactttatgttacgtatatgggattatacttcaccggcgcaattgccgaagcaa
atgtccgacattaaaatcgcgaagaagaagcagaaacagcagaagccgcaaaagaaattg
atacaaaataaaacggacgaggcggagaatgatacgactatgtcaaatagtcaacctatt
gtatataatacaaagtctgaagtagggctaccaaagaaaaaagaaaaaaattcatatttt
aacgaatacaacaaaataataaacgacaaatccaaggttttaaattttatcacaaacgat
ataagaaagaatcaagagcaatacgaaaaagatagcactgccgcaacgctatcgctgttc
tctgaaaaagagcatgttttagaactcattaatcgtgaaaaatcaacacaaaatagttca
aataccgctattgagatgaatatgtggtgtgacaatctgcaaaacaatctgatgtgcgca
gccaaggatcaacaattaaacgacttcctagtatcgctcgcgcctagcgtttctatgaaa
atgtggaaggagatgtgcgaagcatacgcgcaccaattaataaggcaatgtaatgtggag
aaagcagtgtcatatttactttgtatacacaaaatttatgaagctatagaagcattttta
gatgctaatatgtttaaggaggcttacgtgcttgcgagatgcaaattggaccataatgat
ccgtttttgaaaaagatattagaattatggtcggaatggggtgttttcaatggtcatctg
gagcaagcagcttattgtcgcgtagaattaaaacagtttgataaggcggcgaaaattctt
gctcgtcggaaagacgtacattgcttggaggtagcgtctgaattagcgtttctaagcggt
gacgaaggatacggtatgtccttaattgtggatgcgatgacacgtgcccttatcaaatca
gattggtcaaaagcacgttctcttatcgcggatctccgacagattcagtatttgaacgtg
cacatagatgctcacgaggcgattatgagcacatataaaaaacaagctgagtttgataca
atgcggaggtggttggaaaaaaaggaaagccatggagcgttacaaactctagaaatgaaa
tataatgcttcttactatgacaccttgtgcaagaatgaaaatatcaatgctattctgaaa
agtgaatcaagagatacaatgatgcaagtgaaaactacctatcgaatagctatagcggct
acatgtgacgcaaaagagactcgattgaaacatttagcaacagtattaggtgatgtgtac
gagtgcgaggaaatagcaatcgggcacggaacggcgacaagtgaaaaattcttcattcaa
attctcgcgaaaatggatattagaaaaccaacggacgaaggcagcatctacgcgaaaagc
aattatcccgtgtcgcaaaatatacgcgcttatttatgtatcggtcttctgaattggttg
ctgaattatgtggatcagctattgatcgaggaggaaacacaatttatacaattgatattg
gatttgctgggcgatgccataaatgaaacaaccttatcttatcaagataagattcatgaa
cttggtcaactggaagatcaactttcgctcttgacattggatgatgatgtcaaaaatgat
gacgattgtaagagaattaagaaggagatcgaaaaactgaagcttgatggaaacaagttt
agggaagaacgagtttgcatgccgaatcccaaaatcgttttcgataaagcttgtttgctt
gccaacaaattaaatgatattaatcgatttctacttttacattctttagataagttagtc
aaaataaaagaaataaagctacctgcactagaagaaagtccgtcaaaaaagcttgaaaat
atatctcaaaaaatagatgaaagtatattgaaacaatataaaatagaaataaatagttct
attagttcacataaataa

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