Polyergus mexicanus: 138936085
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Entry
138936085 CDS
T10742
Symbol
Mtr4
Name
(RefSeq) exosome RNA helicase MTR4
KO
K12598
ATP-dependent RNA helicase DOB1 [EC:
5.6.2.6
]
Organism
pmec Polyergus mexicanus
Pathway
pmec03018
RNA degradation
Brite
Enzymes [BR:
pmec01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
138936085 (Mtr4)
Messenger RNA biogenesis [BR:
pmec03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
TRAMP complex
138936085 (Mtr4)
Spliceosome [BR:
pmec03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP related factors
138936085 (Mtr4)
Complex C
U4/U6.U5 tri-SnRNP related factors
138936085 (Mtr4)
Ribosome biogenesis [BR:
pmec03009
]
Eukaryotic type
Pre-60S particles
Helicases
138936085 (Mtr4)
Transfer RNA biogenesis [BR:
pmec03016
]
Eukaryotic type
tRNA degradation factors
TRAMP complex
138936085 (Mtr4)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Other DBs
NCBI-GeneID:
138936085
NCBI-ProteinID:
XP_070157264
LinkDB
All DBs
Position
Unknown
AA seq
1009 aa
AA seq
DB search
MANFTEDLFDVFDEHGDDMEIPDISKKIELDAGIKRQLDTEDDKSLVKKLRHDPILDDIN
LEDVVCRIKVHNIETMESCMHEIAIPPEQEYIPLERKQSKPAKEYKFILDPFQKEAILCI
ENNQSVLVSAHTSAGKTVVAEYAIACSLKDKQRVIYTTPIKALSNQKYREFHEEFKDVGL
VTGDVTINPTASVLIMTTEILRNMLYRGSEVMREVGWVIFDEIHYMRDKERGVVWEETLI
LLPDNVHYVFLSATIPNARQFAEWVTHLHNQPCHVVSTDYRPTPLQHYIFPVGGDGIHLV
VDETGQFKEENFNRAMACLQNIGDAAKGDTKGRKGGLRATNSGQTNIFKMVKMIMERNFA
PVIIFSFSKKDCEIYAMQMAKLDLNTLEEKKLVDEVFNNAIDVLNDEDKKLPQVTNLLPL
LRRGIGIHHGGLLPILKETVEILFGEGLIKALFATETFAMGLNMPARTVLFTAPRKFDGK
DFRWITSGEYIQMSGRAGRRGLDDKGIVILMIDEQVSPVVGKAIVQGKPDPINSAFHLTY
NMVLNLLRVEEINPEYMLERSFFQFQNQAGIPVLYNKMKELYTTYNTVNVKRYDEISSYH
DIREQLDRLSGEFRSFLTQPEYLVPFLQPGRLVKVRNECETFDWGIIVNFKKKNPKNPVK
DKTIIVIDILLHISKNSKEGNPIPCREDEEGEMEVVPVLHNLISQISSLRLYYPKDLRPP
DNRKSVLKTIREVKKRFPDGPPLLNPITDMHIEDQAFKDIVKKIEALERRLYAHPLHKDS
DVNMLYEQFLHKEELATQLKQAKEEFKQAKSILQMDELKCRKRVLRRMAYCTSADIIELK
GRVACELNGADELLMTEMIFNGLFNALSVPQMVALISCFVCDEKSNEMPKSTEELSGPLR
QMQDLARRIAKVSTEANLELDEDAYVDRFKPYLMDVIYAWCKGATFLQICKMTDIFEGSI
IRCMRRLEEVLRQLCQAAKGIGNTDLENKFSEAIKLIKRDIVFAASLYL
NT seq
3030 nt
NT seq
+upstream
nt +downstream
nt
atggcgaattttaccgaagatttatttgatgtctttgacgagcatggtgatgatatggaa
ataccggacatttcgaagaaaatcgaactggatgctggaataaagcgacaacttgacacg
gaagatgataaatcacttgttaaaaaattgcgacatgatcctattctggatgacatcaac
ctagaagatgtggtatgtcgaataaaagtacataatatagaaactatggaatcttgtatg
cacgaaattgctattcctcctgagcaagaatatatacctttagaacgtaaacagagtaaa
ccagccaaagaatataaatttatacttgatccattccaaaaagaagcaattttatgcatt
gagaacaatcagtcggttcttgtttccgctcatacttcagctggtaaaactgtcgtagcc
gagtatgcaatagcatgttcgcttaaggataagcagagagtaatatatacaaccccaatt
aaggcattgagtaatcagaagtatagagaatttcatgaggaatttaaagatgttggtctg
gtaacaggtgatgttactataaatccaacagctagcgtattaattatgactaccgaaatt
ttgcgtaatatgctgtacagaggctcagaggtgatgcgcgaggttggttgggtgatcttc
gacgaaattcattacatgcgcgataaagagagaggcgtggtatgggaggagacgcttata
ctgttgccagataatgtacattacgtatttctctctgctaccataccgaatgcacgacaa
tttgcagagtgggtgacacacttgcacaatcagccttgtcatgtggtttcaacagactac
agacctaccccattacaacattatatatttccagttggcggcgatggtattcatctggtt
gtagatgagaccggtcaatttaaagaggaaaatttcaacagagccatggcttgtctgcag
aatataggtgatgcggctaaaggtgacacgaaaggacgtaaaggtggcttgcgcgccacg
aacagtggacaaacgaatatcttcaaaatggtaaaaatgatcatggagagaaatttcgcc
cccgtgataatcttcagtttttcaaagaaagactgcgagatttatgcgatgcaaatggcc
aaattagatttgaacacattagaagagaagaaattggtagatgaggttttcaataatgcg
atagatgtccttaacgatgaggacaaaaagttaccgcaggttacgaacttgctgccactt
ttgcggcgtggaataggtattcatcacggtgggctcttgccgattttaaaagagacagtc
gagatattattcggcgaaggtttgatcaaagcgcttttcgccactgaaacatttgcgatg
ggcttgaatatgcctgcgcgaacggttctgtttacggcaccccgtaaatttgacggtaag
gactttcgttggatcacatcgggtgaatatatccaaatgtccggccgtgcaggcagacga
ggtctagatgacaaagggatcgtcatattaatgatagacgaacaagttagtccagttgtc
ggtaaagctattgttcaaggaaaaccagatccaatcaattctgcctttcatttgacttat
aatatggttcttaatcttctccgagtggaagagattaatccagaatatatgctggaaaga
agtttcttccagtttcaaaatcaagctggtattccggttttgtataataagatgaaggaa
ttatacactacctataatacagtgaatgtcaagagatatgatgagatttcttcttatcat
gatatacgcgaacaactcgatcggctcagcggagagtttcgatcatttttgacgcaacca
gagtatttggttccatttttacaacctggaagactagtaaaagtgagaaacgagtgtgaa
acattcgattggggcattatagttaactttaaaaagaaaaatccaaagaatccagtaaaa
gataagactattattgtcattgatattttacttcacatatcgaaaaattctaaagaaggc
aatccaataccgtgtcgcgaagatgaagaaggcgaaatggaagtagttccagttttgcat
aatttaatttctcaaatcagttcactcaggctatattacccgaaagatctcagaccacct
gataataggaagagtgtactgaaaacaatacgagaagtaaaaaaaagattcccagatggt
cctccattactcaatcctattacagatatgcacatagaagaccaagcttttaaagatatc
gttaaaaaaattgaagcgctagaaagaagattgtatgcacatcctttgcacaaggattct
gatgtgaatatgttatatgaacaatttttacacaaggaggaattggctacacagcttaag
caggccaaggaagaatttaagcaggctaagtctatacttcagatggatgaacttaaatgc
aggaaacgagttttaagaaggatggcatattgcacgtcggcggacattatagaactgaaa
ggacgtgtagcttgcgaactgaacggtgctgacgagctattaatgacagaaatgatcttc
aatggtctttttaatgctttaagcgtgccacagatggtggcattaataagttgttttgta
tgcgatgaaaaatcaaacgaaatgcctaaaagcacagaggaattaagcggtccgctccga
cagatgcaagatttagctcgaagaatagcgaaggtttcaacagaagccaacttggaatta
gacgaggatgcatatgttgacagatttaaaccatatttaatggatgttatatacgcttgg
tgcaaaggcgcaacgttcttacaaatttgcaagatgacagatatatttgaaggatctatt
attagatgtatgcgtcgcttagaagaagtgcttcgacaattatgtcaagctgcaaagggt
attgggaatacagatctagaaaataaatttagtgaggcgatcaaacttataaaacgtgat
attgtgtttgcggcgtccttatatttatga
DBGET
integrated database retrieval system
