KEGG   Polyergus mexicanus: 138936389
Entry
138936389         CDS       T10742                                 
Name
(RefSeq) nuclear RNA export factor 1
  KO
K14284  nuclear RNA export factor
Organism
pmec  Polyergus mexicanus
Pathway
pmec03008  Ribosome biogenesis in eukaryotes
pmec03013  Nucleocytoplasmic transport
pmec03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:pmec00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    138936389
   03015 mRNA surveillance pathway
    138936389
   03008 Ribosome biogenesis in eukaryotes
    138936389
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:pmec03019]
    138936389
   03009 Ribosome biogenesis [BR:pmec03009]
    138936389
Messenger RNA biogenesis [BR:pmec03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Nuclear pore complex
     138936389
   mRNA cycle factors
    Stress granule specific factors
     138936389
Ribosome biogenesis [BR:pmec03009]
 Eukaryotic type
  Pre-60S particles
   Export and cytoplasmic maturation factors
    138936389
SSDB
Motif
Pfam: NXF_NTF2 LRR_NXF1-5 TAP_C Tap-RNA_bind LRR_8 NTF2 DUF7745 LRR_4
Other DBs
NCBI-GeneID: 138936389
NCBI-ProteinID: XP_070157860
LinkDB
Position
Unknown
AA seq 532 aa
MMKQDNIQVPNQVQNVPIIPSQMDSSIAIRIAMGAKMIYERALMARADIWHKIRVIRGSQ
YDKETVLKAILKAIEPTDLIPVKYQVCGEDAYFIARNCGPALEKLCKTNLIIKNVKGDAI
ILVVTLGYASINDLRIHIQPLLLTALTKKYDPNRKTLNLENFHLDPDIEKTVYCPLSQLR
TSNHILKMAKTAIATIEHLNLQRNELFNISAIENSSLTSIKYLDLRHNNLLNMDALTPLK
NLEIVKLWLDGNPLCENYSTANQYVESAKKYCPHLQELDGVSIVPNMPLMYRDYFQDERT
QRLVHKFAYHFFNLHDQLDRTILRGLYHKDAFYSMSFAISNAVAQRTGLNLYTGNRNLLK
KGSKKNTFLYHTQEDILVALSKLPRSYHDKSSFTYDVMYDDDKCIVFCVSGLFKKLSSGT
NVLSFSRTFVLLASLDNEYHILNDQYHIYAAPENVTSDKIVVKYAYDEIVPVCFSPSEKS
VLITRMKQVSKMNDEWCESYLSEGQWDMRKAISNFMKDLKSSSISENAFVNK
NT seq 1599 nt   +upstreamnt  +downstreamnt
atgatgaaacaagataatattcaggttccgaatcaggtacagaatgtaccaatcatccca
tctcaaatggattcctcaatcgctataagaatagctatgggagcaaaaatgatctacgaa
agagcactgatggctcgtgcggatatatggcacaaaatcagagttatcagaggctcccag
tacgacaaggagacagttttgaaagctattttaaaagcgatagaaccaaccgatttaata
ccagtgaaatatcaagtttgcggagaggatgcgtatttcatagcgagaaattgcggccct
gctctcgaaaagctgtgcaaaacaaatctgataattaaaaatgtcaaaggggatgctatt
attcttgtggtgactttgggatacgcctcgatcaatgatctaagaatccacatacaaccc
ttattattaaccgcactgaccaagaaatacgatccaaatcgaaagacgttaaacttggaa
aactttcatttagatccagatatagagaaaactgtctattgcccattgtcacagctcaga
acatccaatcacattttgaagatggccaaaactgctatagccactattgaacatctgaat
ctacaacgcaacgagctgttcaacatatcggcaatagagaattcgagtttaacatccatt
aaatacttagatttgagacataataatttattgaatatggatgcgctaactcccctcaag
aatctggagatcgtcaaactttggctggacggaaatccactttgtgagaattactcaact
gcgaaccagtacgttgaatctgcgaaaaaatattgtccacatttgcaagaactagatggt
gtatccattgtgccaaatatgccgttgatgtacagagactactttcaggacgaaaggacg
cagcgtctcgtacataaattcgcctatcatttctttaatttacacgatcaactcgatagg
acgattttacgaggactttatcacaaggacgcgttttattccatgagcttcgccatttcc
aatgccgtcgcgcaaaggactggacttaatctgtacacaggcaacagaaatctgctaaag
aaaggatcgaagaaaaatacgtttctctatcatactcaggaggacattctggtagctttg
agtaaattgcccaggtcctatcacgacaagagttccttcacgtacgacgtcatgtatgac
gatgacaagtgcatcgtgttctgtgtctcgggattattcaaaaagctaagttccggcacg
aacgtgctgtcgttttctagaacattcgtactgttggcttccctggacaacgagtatcac
attttaaacgaccagtatcatatatatgcagcgccagagaatgttacatccgataaaata
gtagtgaaatatgcatacgacgagatcgtgccagtttgcttcagtccgagcgaaaagtcc
gtgctgatcaccagaatgaaacaggtgtccaaaatgaacgacgaatggtgcgaatcgtat
ttgtcggaaggtcaatgggacatgcgaaaggcgatatccaactttatgaaggatttgaaa
agttcctcgatatcggaaaacgcattcgttaataaatag

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