Polyergus mexicanus: 138936772
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Entry
138936772 CDS
T10742
Name
(RefSeq) eukaryotic initiation factor 4A-III
KO
K13025
ATP-dependent RNA helicase [EC:
5.6.2.7
]
Organism
pmec Polyergus mexicanus
Pathway
pmec03013
Nucleocytoplasmic transport
pmec03015
mRNA surveillance pathway
pmec03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pmec00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
138936772
09122 Translation
03013 Nucleocytoplasmic transport
138936772
03015 mRNA surveillance pathway
138936772
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pmec03019
]
138936772
03041 Spliceosome [BR:
pmec03041
]
138936772
03009 Ribosome biogenesis [BR:
pmec03009
]
138936772
03012 Translation factors [BR:
pmec03012
]
138936772
Enzymes [BR:
pmec01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
138936772
Messenger RNA biogenesis [BR:
pmec03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
138936772
mRNA cycle factors
Stress granule specific factors
138936772
Spliceosome [BR:
pmec03041
]
Complex C
Other components
EJC/TREX
138936772
Ribosome biogenesis [BR:
pmec03009
]
Eukaryotic type
90S particles
Helicases
138936772
Translation factors [BR:
pmec03012
]
Eukaryotic type
Initiation factors
eIF-4
138936772
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
Cas3-like_C_2
AAA_22
UvrD-helicase
AAA_30
TniB
Utp25_C
NAT10_TcmA_helicase
Motif
Other DBs
NCBI-GeneID:
138936772
NCBI-ProteinID:
XP_070158512
LinkDB
All DBs
Position
Unknown
AA seq
402 aa
AA seq
DB search
MADKSRRVAQTEDLSNVEFETSEDVEVIPTFDNMGLRDELLRGIYAYGFEKPSAIQQRSI
KPIMKGRDVIAQAQSGTGKTATFSIAILQSLDTQVRETQVLVLSPTRELATQIQKVILAL
GDFMNVQCHACIGGTNLGEDIRKLDYGQHVVSGTPGRVFDMIKRRVLRTRAIKMLVLDES
DEMLNKGFKEQIYDVYRYLPPATQVVLVSATLPHEILEMTSKFMTDPIRILVKRDELTLE
GIKQFFVAVEREEWKFDTLCDLYDTLTITQAVIFCNTKRKVDWLTEKMREANFTVCSMHG
DMPQKERDNIMKEFRSGQSRVLITTDVWARGIDVQQVSLVINYDLPNNRELYIHRIGRSG
RFGRKGVSINFVKTDDIRILRDIEQYYSTQIDEMPMNVADLI
NT seq
1209 nt
NT seq
+upstream
nt +downstream
nt
atggcggataaatcacgtcgcgtggcgcagacagaggatttatcaaatgtcgagtttgaa
accagcgaagatgtcgaagttattcctaccttcgataatatgggtctccgcgacgaattg
ttacgtgggatctacgcatacggtttcgagaaaccgtctgctattcagcaacgatccatt
aaacctattatgaagggcagagatgtgatagcgcaagcacaatctggtacgggcaagact
gctactttctcaattgcaatattgcaatcattggatacacaagtacgggaaactcaagtt
ctggttttgtcgccgactcgagaacttgcaactcagattcagaaagtgattctcgcatta
ggagactttatgaatgtacaatgtcatgcttgtatcggcggcacaaatcttggggaagat
attagaaagcttgattatggtcaacatgttgtatccggcacacctggtagagtatttgat
atgatcaagagacgggtacttagaactagagcgatcaaaatgttagtgctggatgaatcc
gacgaaatgttgaacaaaggcttcaaagagcaaatttacgatgtataccggtatctacca
ccggcgacacaagtggttctagtttcagccactttaccacatgaaattcttgaaatgacc
agtaaatttatgacggatcctattcgtattctcgtcaaacgtgatgaattgacattggaa
ggaattaaacaattctttgtcgctgtagaacgagaagaatggaaatttgacacactttgt
gatttgtatgacacattaacgataacgcaagcagttatcttctgtaacaccaagcgtaaa
gtagattggttgacagaaaagatgcgagaagctaactttactgtatgctctatgcatgga
gacatgcctcaaaaggaacgagacaacataatgaaagaattccgatctggtcaaagtcgc
gtgctaatcacaacggatgtttgggcgagaggtatcgacgttcagcaagtgtcactcgta
attaattatgatttacctaacaatcgtgaattatacattcatagaataggtcgatcgggt
cgtttcggtcgtaaaggtgtctcgataaactttgtaaaaactgatgatataaggattctt
cgagatatcgagcagtattactctacacaaatagacgaaatgccgatgaacgttgccgac
ctgatataa
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integrated database retrieval system
