Polyergus mexicanus: 138936914
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Entry
138936914 CDS
T10742
Symbol
Upf3
Name
(RefSeq) regulator of nonsense transcripts 3A isoform X1
KO
K14328
regulator of nonsense transcripts 3
Organism
pmec Polyergus mexicanus
Pathway
pmec03013
Nucleocytoplasmic transport
pmec03015
mRNA surveillance pathway
Brite
Messenger RNA biogenesis [BR:
pmec03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
138936914 (Upf3)
mRNA cycle factors
P-body specific factors
138936914 (Upf3)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Other DBs
NCBI-GeneID:
138936914
NCBI-ProteinID:
XP_070158805
LinkDB
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Position
Unknown
AA seq
704 aa
AA seq
DB search
MTEETQQQVESAARNDSCSAQQNETQLNTSDVGKVKDNKKEKCRPMTKVVIRRLPPTMTQ
DQFLEQVSPLPEHDHLYFVKADMSLGQFAFSRAYINFMEQQDIFVFREKFDNYVFIDSKG
VEYPAVVEFAPFQRLPKKRAGKKKDLKCGTIESDLYFISFLESLKNQEVDSGVTQSKTEY
SYQPPDNTAKKITTTPLLEYLKLRKQEKQRLRDEKREERRRRDMEKRRTRDDPVISKHIC
NMENDQSSNFTTSHPTNIKFEDTFFQCFVKNSSIHKYREDIFLDRLIHKQVQDKLCKNHQ
RFYDYVKKTKTNRSMFDVKKLHLNGNNQINWQTYFYFHKDDHVLRNPDLDKESSKDDKEN
KEEKLSPKELKNRHKRDEKIREKLSRDREIKPIVKGYRERIDDRNKEMKHRRYDEKRSYG
RRDDRENVREERRLDLKDDRRYEAKEEFRESRDRKMEERRGKSYEKMRQEKKKLAETKKQ
IVDINGDNANSKKIKEEYEVVREKEDGNGKESVHKEDEFKHAEDNECAQHNTVENRVTVD
AMRNCRDETAEEGNDSSNPDANDEDESEEKESKVMKRRNSLESGGEGGAGDGSCLRRHKS
LDGDGESNLQKNEEKEKDKKDPRLERRIRNKDRPAMEIYRPGMGKFSKQRLEREKSNNDE
RASLSQSPTPNPGTSSSTTGKSGKSGATEVRSMTFKRSVTRDAV
NT seq
2115 nt
NT seq
+upstream
nt +downstream
nt
atgaccgaggaaacgcaacagcaggtcgagagtgctgcgcgaaatgacagctgttccgca
cagcagaatgaaacgcagctgaatacgtcagatgttggaaaagtcaaagataacaaaaaa
gaaaaatgtcgtcctatgacaaaggtggtgatcagaagattgcctccgacaatgactcag
gatcaattcttggagcaagtgtccccgctgccagaacacgatcatttatactttgtgaag
gccgacatgtcgctcggccaattcgcgttttctcgcgcttacattaattttatggagcaa
caagatatttttgtgtttcgagaaaagttcgacaattatgtgtttatagattccaagggg
gtggaatatcctgcagtagtagagttcgcaccttttcagagattaccaaagaagcgagcc
ggcaagaagaaggatcttaaatgtggtactatcgagagcgatttgtatttcataagtttt
ttagagagtttaaagaatcaggaggttgattcgggtgtaactcaatcaaaaactgaatat
tcttatcaaccaccggacaacacagcaaagaagatcacgaccactccgttactcgaatat
ctgaagcttcgtaaacaggagaagcaacgtcttagggatgaaaaacgtgaggaaaggcgg
aggagagatatggaaaaacgcagaacaagagacgatcctgttatttctaagcacatatgt
aatatggaaaacgatcaatcatccaattttaccacatctcatcccacaaatattaaattt
gaagatacgttttttcaatgctttgtcaaaaactcaagcatacataaatacagagaggat
atcttcctcgatagacttatacacaaacaagtgcaagataaattatgtaagaatcatcaa
agattttatgactatgttaaaaagacgaaaacaaatagaagtatgtttgatgtcaagaaa
ctacatttaaatggcaataatcaaattaactggcaaacctatttttatttccacaaagac
gaccatgttttaagaaatccggatttagataaagagtctagtaaggacgacaaagaaaat
aaagaggagaaactttcaccaaaggaattgaagaataggcacaaaagagacgaaaaaata
agagagaaattatctcgagatagggagattaaacccatcgttaaaggatatagagagcga
attgacgatagaaacaaagagatgaagcatagacgatacgatgagaagaggtcttatgga
agacgtgatgatcgggagaatgtgagagaggaaagaaggcttgatctcaaggatgacagg
agatacgaggcgaaggaagagtttagggaatccagagacaggaagatggaggaaagacgc
ggaaaaagttacgagaaaatgagacaagagaagaagaagttggcagaaacgaagaaacag
attgttgatattaatggggacaatgcgaactcaaaaaagataaaggaagaatacgaagtc
gtacgagagaaggaagacggaaatggcaaagagtctgtacacaaggaggatgaattcaaa
catgctgaagacaacgaatgcgcgcaacataatactgtcgagaatcgagtaacagtggac
gcgatgcgaaattgtagagatgaaactgcagaagagggaaatgattcatccaatccagat
gcgaacgatgaagatgaatctgaggagaaagaatcgaaagtcatgaagaggcgtaattcg
cttgaaagtggtggcgaaggtggcgcaggcgatggtagctgtctgcgacgtcacaaatcg
ttggatggggatggtgaaagtaatttgcagaagaacgaagagaaagaaaaggataaaaaa
gatccacgattggaacgcagaatacgaaataaagatcgtccagcaatggagatctacaga
cccggcatgggcaagttcagtaagcagcggctagaacgtgaaaaatcaaacaacgatgaa
cgagcatctctttcgcaaagtccgacgccgaatcctggtacttcttcctctacaactggc
aaatccggaaaatccggagcgacagaagtacgctcgatgacgttcaaacgcagcgttact
cgtgatgcagtataa
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