Polyergus mexicanus: 138937024
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Entry
138937024 CDS
T10742
Name
(RefSeq) probable ATP-dependent RNA helicase DDX43
KO
K17043
ATP-dependent RNA helicase DDX43 [EC:
5.6.2.7
]
Organism
pmec Polyergus mexicanus
Brite
KEGG Orthology (KO) [BR:
pmec00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pmec03041
]
138937024
Enzymes [BR:
pmec01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
138937024
Spliceosome [BR:
pmec03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
138937024
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
KH_1
KH_KhpA-B
MOEP19
ResIII
KH-I_KHDC4-BBP
KH_2
CMS1
KH_5
Motif
Other DBs
NCBI-GeneID:
138937024
NCBI-ProteinID:
XP_070158975
LinkDB
All DBs
Position
Unknown
AA seq
658 aa
AA seq
DB search
MSHRREDNRTSSDRYDQNYRNWEGNRDRRDSQFQNYYNRSSSDNWNSSNTQTYSNSSRKR
STDNSSNNTSELVIYIDANNVGRLIGRGGSKIKALQDESNAKINIDKQSNENGQTAVTLI
GTDEAQQRAKSLIEELLIDRSISHQGIESNQKRETNFGKKKEEIDWNNFDWVKANEEYEN
HQKQRWATLPPIIKNFYKEDVYVALMPETRVAELRKINNDIEVKFVFENEEGFDKIKIPN
LIQTFKQAFQNYPEILREIQKQGFEKPSPIQCQAWPILLSGQDLIGIAQTGTGKTLAFLL
PALIHIDGQVTPREERPGPNVLVMAPTRELALQIEKEVGKYSYRGIKAVCVYGGGSRKQQ
IDIVTKGVQIVIATPGRLNDLVQAGVLNVTAVTYLILDEADRMLDMGFEPQIRKTLLGVR
PDRQTVMTSATWPPGVRRLAQSYMKNPIQVCVGSLDLAAVHSVTQKICLINEDEKLDMMH
QFLREMGSHDKVIVFFGKKAKVDDISSDLALANIDCQSIHGDREQADREQALEDLKTGTV
QILLATDVASRGIDIEDITYVLNYDFPKDIEEYVHRVGRTGRAGRTGESITFMTRQDWHH
AKELISILEEADQEVPEELHKMSERYEAWKQRKDSERSGLRNSRDGNRGRQGYNRSRW
NT seq
1977 nt
NT seq
+upstream
nt +downstream
nt
atgagtcatagaagggaagataacagaacatcatcagacagatatgatcaaaattatcgc
aattgggaaggaaacagagacagaagagacagtcagtttcagaattactataacagatct
tccagtgataattggaatagttcaaatactcaaacttacagtaacagttcacgtaagagg
agtactgataatagttcaaacaatacgagtgaacttgttatatacattgatgccaataat
gtcggaagacttattggaagaggtggtagcaaaattaaagctctgcaagatgagagcaac
gctaagatcaatattgacaaacaatcaaatgaaaatggacaaactgctgtgacattgatt
ggtacagacgaagcacagcaacgagctaaaagtttaatagaggaattattaattgataga
agtatttcacatcaaggtatagaatctaaccagaagagagaaactaactttggaaaaaag
aaagaagaaattgattggaataattttgattgggtcaaggccaatgaagaatatgaaaac
catcagaagcaaagatgggcaactttgcctcctattataaaaaatttttacaaggaggat
gtgtatgttgctcttatgccagaaacgagagtagctgaactcaggaaaatcaacaatgat
atagaagttaaatttgttttcgagaatgaagaaggctttgataagataaaaataccaaat
cttattcaaacttttaaacaagctttccaaaactatccagaaattcttagagaaatacaa
aaacagggatttgaaaaaccgagtcctatacaatgtcaggcatggcctattctattgagt
ggtcaagatctcattggaatagcgcaaactggaactggaaaaactcttgcttttttattg
cctgctttaattcatatcgatgggcaagtaactccacgcgaggagcgtcctggaccaaat
gtccttgttatggcaccaacgagagaattagcattgcaaattgaaaaagaagtaggaaaa
tattcttatcgcggcattaaagcagtgtgtgtttatggtggcggaagtcgcaagcaacaa
atcgatattgtaacaaagggcgtgcaaatagtaattgcgactccgggaagattaaatgac
ttggtgcaggcaggagtgttgaatgtaacagctgtaacatatctcatacttgatgaagcc
gatcgtatgttggacatgggttttgaaccacaaattcgcaaaactttgctgggtgtgcgg
ccagacagacaaactgttatgacgagtgctacatggcctccaggtgtaagacgcttagct
caatcatatatgaaaaatcccattcaagtatgcgttggatcacttgatctagcagctgtt
cattctgtaacacagaagatttgcttgattaatgaagatgaaaagttagatatgatgcac
cagttcttgcgtgagatgggctctcatgataaagtgatagtattttttggtaagaaggca
aaggtggatgatatttctagcgatctagctttagcgaatatcgattgtcaaagcattcac
ggtgatagagagcaagcggatagagaacaagcattagaagatctaaagactggaacggtt
cagattcttctcgcgaccgatgtggctagtcgaggaatcgatattgaagacattacatat
gtattgaattatgactttccaaaggatatagaggaatacgttcacagagtcggtcgtacc
ggacgcgcgggtcgaacaggagaaagtatcacttttatgacaagacaggactggcatcat
gctaaggaactcatcagtattcttgaagaggctgatcaagaagtacctgaggaattacat
aaaatgtctgaaagatatgaagcatggaagcagaggaaagattcagaacgatccggttta
agaaatagtagagacggcaatagaggtagacaaggctataatcgtagccgatggtaa
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