Polyergus mexicanus: 138937228
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Entry
138937228 CDS
T10742
Name
(RefSeq) DNA excision repair protein ERCC-6 isoform X1
KO
K10841
DNA excision repair protein ERCC-6
Organism
pmec Polyergus mexicanus
Pathway
pmec03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
pmec00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
138937228
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pmec03036
]
138937228
03400 DNA repair and recombination proteins [BR:
pmec03400
]
138937228
Chromosome and associated proteins [BR:
pmec03036
]
Eukaryotic type
Chromatin remodeling factors
B-WICH complex
138937228
DNA repair and recombination proteins [BR:
pmec03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
Other TCR factor
138937228
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
Motif
Other DBs
NCBI-GeneID:
138937228
NCBI-ProteinID:
XP_070159365
LinkDB
All DBs
Position
Unknown
AA seq
1080 aa
AA seq
DB search
MAETTNHDDTASNIDNDTMKNILDNVLPENLQEIVSIKTEDSILQEVSEHIKRVTRSNNQ
QVDGTQENNIELNAKEDGEIDDKEDHKAKLQKQVETGEITPFEAVSKQSILEQNERGTNK
GTQLLDLEKYFKQQAILAEQKRKLKKVSKIPCDKDHSVPAKKTKLSSIDTKTIKRYQKSK
AETRKNDILQIIDEATCSNITNEIVDNSSESEYIPSDDDSDTEYKVSCVSKKRKTLAKSG
NIRTKRTQDDGDSRIFKQRIETECYPKDEAMHKINDIFKVPQCIWENLYRYQRVAVQWLW
ELHSRKLGGLMGDEMGLGKTVQVIAFLAGLDCSELLSHNGRYRGLGPTIVVCPATLMEQW
VKHFHDWWPFFRIVVLHHSGGYNGDPESLIESLQTGGILITSYNGVLRHKDLLVSNQWHY
VILDEGHKIRNPQAKVSRAVKQLSTPHRLLLSGSPMQNSLKELWSLFDFILPGKLGTLPA
FLEHCATPITRGGYANATPLQEATALQVATMLKDTIMPYMLRRTKNDVKHHLILPEKNEQ
VLFCSLTDEQKKLYKKYLCSEDVSFILHEKNNHDAGRYRARFLIALSALRKICNHPDLFL
YTKEFDSDEDITLSEKQLDEFGYWKRAGKMNVVRSLLKIWHKQQHRVLLFTQGRQMLHVL
ECLLQHEGYTYLRMDGTTAVSQRQQTIHTFNTHSSYFVFLLTTRVGGLGVNLTGADRVII
YDPDWNPATDAQARERAWRIGQNKQVTVYRLITAGTIEEKMYHRQIFKILLSNKVLDEPR
QRRVFKTTDLVELFNLNEPIDGKSSESDHLFRESKLMPASIGFSLSKIEQMKRLASAISK
KISANVRSTCDKNKNANNSICEGKQHDEQNNNSRHTEILATKNDTFVDKISSCDLMSISK
SPARYNEDSNTNSNADIERSSNVENKNTFNENNQQTIITIKSINDNTMEKKNKSVLNDDK
ITSYNVSSICKHKKHKKDSHSDKRNISAIFEGERVSCLIGRRLGHSNEKEESISTTDDDY
VLRKLFTKSTVSSAFEHEAVLSNACRNSDGENTLQRFARESAQESMNFVRQSGKFCWRPA
NT seq
3243 nt
NT seq
+upstream
nt +downstream
nt
atggcagagacaactaatcatgatgatactgcatcgaacattgataatgacacgatgaaa
aatatactagataatgtgcttcctgaaaatttacaggagatagtatctattaaaacagaa
gacagtattttgcaagaagtatcggaacatattaaacgcgttacaaggtcaaacaatcag
caggtggatggaacacaagagaataatatagagctgaatgccaaggaagatggggaaatt
gatgacaaagaggatcacaaggcaaaattgcaaaaacaggtcgaaactggagagattact
ccatttgaagcagtatctaagcaatcaattttagagcaaaacgaaagaggtaccaataaa
ggcactcaattgttagaccttgaaaagtatttcaagcagcaagctattcttgcggagcaa
aaaagaaaattgaagaaagtatctaagattccttgtgacaaagatcattcagtaccagcc
aaaaaaacaaaattatccagtattgacacaaagacaatcaaaagataccaaaaatctaaa
gctgagactagaaaaaatgatattctgcaaattatagatgaggcaacttgctcaaatata
acaaatgaaattgtagacaatagttctgaaagcgaatacattcctagtgatgacgactcg
gatacagaatataaagtatcatgtgtatctaaaaagaggaaaactttggctaaatcagga
aacatacgcacaaagagaactcaagacgacggagatagtcgaatattcaagcaaagaata
gaaacagaatgctatcctaaagatgaagcaatgcacaaaattaatgatatctttaaagtg
ccacaatgtatttgggaaaacttatacaggtatcaaagggtcgccgttcaatggctctgg
gaattacacagtcgtaagttgggcggtttgatgggtgatgagatgggattaggaaaaact
gtgcaagttattgcatttctcgccggtttagactgtagtgaattactctctcacaatgga
agatacagaggattaggaccaactatagttgtatgccctgctactttaatggagcagtgg
gtgaaacattttcacgattggtggcctttctttagaatcgttgtacttcatcattctggg
ggttacaatggtgatccagaaagtctgatagaatctttgcaaaccggtggaatactcatt
acttcttacaatggagttctcaggcacaaagatttgctcgtatccaatcagtggcattat
gttattctcgatgaaggccacaagattcgtaatccgcaagcaaaggtgagccgtgcagtg
aagcaactctcgacaccgcatcgattgctattgagtggcagtcctatgcagaattctctg
aaggagctgtggtcattgtttgattttattttacctggtaaattgggcaccctgcctgca
ttcctggaacattgcgcgactcccataacacgtggcggttatgcaaatgctacgccatta
caggaagccacagctctccaagtagccactatgctgaaagacaccatcatgccctacatg
ctccgaaggacgaagaacgatgtgaagcatcatctcattttgccggagaaaaacgagcag
gtgttattttgtagcttaacggacgagcagaaaaaattatataaaaagtatctatgttcg
gaagatgtgtcctttattttacatgaaaaaaataatcatgacgctggaagatacagagca
agatttcttatcgcattgtcagcattgagaaagatatgcaatcatccagacttgttcctg
tataccaaagaattcgattcagatgaagatatcactttgtccgaaaaacagttagatgaa
tttggttactggaaacgtgctggaaaaatgaatgtggtccgatctctcttgaaaatttgg
cataaacaacaacatagagtgttacttttcactcaaggaaggcagatgcttcacgttttg
gagtgtctattgcaacacgaaggatatacctatttgagaatggatgggacaacagctgta
tctcaacgacaacaaacgattcacacatttaatactcactcgtcatatttcgtgttctta
ctgaccacacgcgtaggaggtctgggagtaaatctaaccggtgcagatcgagtaatcatt
tacgatccggattggaatccagctacggatgctcaagcaagggaacgcgcatggagaata
ggccagaataaacaagtcactgtttacaggctgattaccgctggtacgattgaagaaaag
atgtatcatagacagatctttaaaatattactttcgaacaaagttcttgatgaaccacgt
cagcgtcgagtatttaaaacgacagatttagtagaattatttaatctaaacgagccgata
gatggcaagtcttcagaatctgaccatttatttagagaatccaaattaatgcccgcatct
atcggcttttctctcagtaagatcgaacagatgaaaagattagcttcggctatcagcaaa
aaaataagcgcgaatgtaagatcaacatgtgacaaaaataagaatgcaaataatagtatt
tgcgagggaaaacaacatgatgaacaaaataataattcgagacacaccgagattctcgct
acgaaaaatgatacatttgtggacaaaatatcatcttgcgatctaatgagcatatcaaaa
tctccagccagatataatgaagattcgaatacgaattcaaatgcggatattgaaaggagt
agcaatgtagaaaataagaatacatttaacgagaataatcagcaaactataattacaata
aaatctatcaatgataataccatggaaaagaaaaataaatccgttttaaatgacgataaa
atcacctcatataatgtatcgtctatttgtaaacataagaagcataaaaaagattcacat
tcggacaagagaaatatttccgcaatatttgagggagagcgtgtttcttgtctgataggt
cgccggctaggacattctaatgaaaaggaagaatcaatttcgactacggacgatgattat
gtattgagaaaattattcaccaaatcaactgtcagttccgcctttgaacacgaagcagta
ttatcgaatgcatgtcgtaatagcgacggtgaaaacacgctgcaacgtttcgcacgtgaa
tcggcgcaagaaagcatgaatttcgttcgtcaatcggggaaattttgctggagaccagcg
tag
DBGET
integrated database retrieval system
